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(-) Description

Title :  XRAY STRUCTURE OF HUMAN FURIN BOUND WITH THE 2,5-DIDEOXYSTREPTAMINE DERIVED SMALL MOLECULE INHIBITOR 1N
 
Authors :  S. O. Dahms, J. Guan-Sheng, M. E. Than
Date :  28 Nov 16  (Deposition) - 10 May 17  (Release) - 31 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Proprotein Convertase, Inhibitor, Protease, Complex, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. O. Dahms, G. S. Jiao, M. E. Than
Structural Studies Revealed Active Site Distortions Of Huma Furin By A Small Molecule Inhibitor.
Acs Chem. Biol. V. 12 1211 2017
PubMed-ID: 28402100  |  Reference-DOI: 10.1021/ACSCHEMBIO.6B01110

(-) Compounds

Molecule 1 - FURIN
    Chains: A
    EC Number: 3.4.21.75
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293S
    Expression System Common: HUMAN
    Expression System Taxid: 9606
    Gene: FURIN, FUR, PACE, PCSK3
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: DIBASIC-PROCESSING ENZYME,PAIRED BASIC AMINO ACID RESIDUE- CLEAVING ENZYME,PACE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 10)

Asymmetric/Biological Unit (4, 10)
No.NameCountTypeFull Name
11N2Ligand/Ion1-[(1~{R},2~{R},4~{S},5~{S})-2,4-BIS(4-CARBAMIMIDAMIDOPHENOXY)-5-[(4-CARBAMIMIDAMIDOPHENYL)AMINO]CYCLOHEXYL]GUANIDINE
2CA3Ligand/IonCALCIUM ION
3CL1Ligand/IonCHLORIDE ION
4NA4Ligand/IonSODIUM ION

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:174 , ASP A:179 , ASP A:181 , HOH A:736 , HOH A:762 , HOH A:1071binding site for residue CA A 601
02AC2SOFTWAREASP A:115 , ASP A:162 , VAL A:205 , ASN A:208 , VAL A:210 , GLY A:212binding site for residue CA A 602
03AC3SOFTWAREASP A:258 , ASP A:301 , GLU A:331 , HOH A:825 , HOH A:932 , HOH A:1023binding site for residue CA A 603
04AC4SOFTWARETHR A:309 , SER A:311 , THR A:314 , SER A:316 , HOH A:867binding site for residue NA A 604
05AC5SOFTWARESER A:279 , GLY A:284 , HOH A:748 , HOH A:757 , HOH A:1104 , HOH A:1121binding site for residue NA A 605
06AC6SOFTWARESER A:544 , HOH A:804binding site for residue NA A 606
07AC7SOFTWAREGLU A:546 , HOH A:1074 , HOH A:1089binding site for residue NA A 607
08AC8SOFTWAREARG A:276 , TYR A:313 , LYS A:449 , TYR A:571binding site for residue CL A 608
09AC9SOFTWAREARG A:185 , ASP A:191 , ASN A:192 , LEU A:227 , ASP A:228 , GLY A:229 , GLU A:230binding site for residue 1N A 609
10AD1SOFTWAREASP A:153 , HIS A:194 , CYS A:198 , LEU A:227 , VAL A:231 , GLU A:236 , SER A:253 , GLY A:255 , ASP A:264 , TYR A:308 , SER A:368 , HOH A:770 , HOH A:1025binding site for residue 1N A 610

(-) SS Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1A:211 -A:360
2A:303 -A:333
3A:450 -A:474

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5MIM)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5MIM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5MIM)

(-) Exons   (0, 0)

(no "Exon" information available for 5MIM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:473
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhh...........hhhhhhhh.......eeeeee..............hhhhhee..................hhhhhhhhhhhh...............eeeeee......hhhhhhhhhh.......eeee..............hhhhhhhhhhhhhhhhhhh..eeeee...hhhhh.hhhhh.......eeeeeee.................eeee.........eeeee...eeeeee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh..........ee.....ee.........hhhhhhhhhh........eeeeee.....ee...eeeeeeee...........eeeeeeeeeeeee.hhh.eeeeee.....eeeee...........eeeeeeee.........eeeeeeeee.......eeeeeeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mim A 109 VYQEPTDPKFPQQWYLSGVTQRDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNANDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIGKRLEVRKTVTACLGEPNHITRLEHAQARLTLSYNRRGDLAIHLVSPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYGTASGSLVPR 581
                                   118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5MIM)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5MIM)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5MIM)

(-) Gene Ontology  (54, 54)

Asymmetric/Biological Unit(hide GO term definitions)

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  5mim
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  FURIN_HUMAN | P09958
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FURIN_HUMAN | P09958: 4omc 4omd 4ryd 4z2a 5jmo 5jxg 5jxh 5jxi 5jxj

(-) Related Entries Specified in the PDB File

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