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(-) Description

Title :  SOLUTION STRUCTURE OF A REPACKED VERSION OF HIF-2 ALPHA PAS-B
 
Authors :  F. Correa, J. Key, B. Kuhlman, K. H. Gardner
Date :  17 Jun 16  (Deposition) - 17 Aug 16  (Release) - 17 Aug 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Cavity, Repacking, Rosetta, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Correa, J. Key, B. Kuhlman, K. H. Gardner
Repacking Of Internal Hydrated Hif-2 Alpha Cavity Removes Allosteric Binding Site
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ENDOTHELIAL PAS DOMAIN-CONTAINING PROTEIN 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: RESIDUES 239-349
    Gene: EPAS1, BHLHE73, HIF2A, MOP2, PASD2
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: EPAS-1,BASIC-HELIX-LOOP-HELIX-PAS PROTEIN MOP2,CLASS E BASIC HELIX-LOOP-HELIX PROTEIN 73,BHLHE73,HIF-1-ALPHA-LIKE FACTOR,HLF, HYPOXIA-INDUCIBLE FACTOR 2-ALPHA,HIF2-ALPHA,MEMBER OF PAS PROTEIN 2, PAS DOMAIN-CONTAINING PROTEIN 2

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5KIZ)

(-) Sites  (0, 0)

(no "Site" information available for 5KIZ)

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:114
                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeeeee.....eeee.hhhhhhh..hhhhhh..hhhhh.hhhhhhhhhhhhhhh....eee...eeee.....eeeeeeeeeeee......eeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 5kiz A 236 GEFLDSKTFLSRFSMDMKFTYCDDRITELIGYHPEELLGRSASEFWHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQMTVIYNPRNLQPQCIMAVNYVLSEIEK 349
                                   245       255       265       275       285       295       305       315       325       335       345
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (43, 43)

NMR Structure(hide GO term definitions)

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  5kiz
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  EPAS1_HUMAN | Q99814
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        EPAS1_HUMAN | Q99814: 1p97 2a24 3f1n 3f1o 3f1p 3h7w 3h82 4ghi 4gs9 4pky 4xt2 5tbm 5ufp

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5KIZ)