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(-) Description

Title :  CRYSTAL STRUCTURE OF HSAD BOUND TO 3,5-DICHLORO-4-HYDROXYBENZENESULPHONIC ACID
 
Authors :  A. Ryan, E. Polycarpou, N. A. Lack, D. Evangelopoulos, C. Sieg, A. Halma S. Bhakta, A. Sinclair, O. Eleftheriadou, T. D. Mchugh, S. Keany, E. Lo R. Ballet, A. Abihammad, A. Ciulli, E. Sim
Date :  16 May 16  (Deposition) - 05 Apr 17  (Release) - 05 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.68
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Hsad, M. Tuberculosis, Cholesterol, Inhibitor, Mcp-Hydrolase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Ryan, E. Polycarpou, N. A. Lack, D. Evangelopoulos, C. Sieg, A. Halman, S. Bhakta, O. Eleftheriadou, T. D. Mchugh, S. Keany, E. D. Lowe, R. Ballet, A. Abuhammad, W. R. Jacobs, A. Ciulli, E. Sim
Investigation Of The Mycobacterial Enzyme Hsad As A Potential Novel Target For Anti-Tubercular Agents Using A Fragment-Based Drug Design Approach.
Br. J. Pharmacol. V. 174 2209 2017
PubMed-ID: 28380256  |  Reference-DOI: 10.1111/BPH.13810

(-) Compounds

Molecule 1 - 4,5:9,10-DISECO-3-HYDROXY-5,9,17-TRIOXOANDROSTA-1(10),2- DIENE-4-OATE HYDROLASE
    Chains: A, B
    EC Number: 3.7.1.17, 3.7.1.8
    Engineered: YES
    Expression System: PSEUDOMONAS PUTIDA
    Expression System Plasmid: PVLT31
    Expression System Strain: KT2442
    Expression System Taxid: 303
    Expression System Vector Type: PLASMID
    Fragment: HSAD
    Gene: HSAD, BPHD, MT3674
    Organism Scientific: MYCOBACTERIUM TUBERCULOSIS (STRAIN CDC 1551 / OSHKOSH)
    Organism Taxid: 83331
    Strain: CDC 1551 / OSHKOSH
    Synonym: 2-HYDROXY-6-OXO-6-PHENYLHEXA-2,4-DIENOATE HYDROLASE,HOPDA HYDROLASE,META-CLEAVAGE PRODUCT HYDROLASE,MCP HYDROLASE

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
16OR2Ligand/Ion3,5-DICHLORO-4-HYDROXYBENZENE-1-SULFONIC ACID
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
16OR4Ligand/Ion3,5-DICHLORO-4-HYDROXYBENZENE-1-SULFONIC ACID

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:44 , GLY A:45 , GLY A:46 , SER A:114 , LEU A:115 , GLY A:154 , LEU A:158 , PHE A:173 , MET A:177 , VAL A:243 , HIS A:269 , TRP A:270binding site for residue 6OR A 301
2AC2SOFTWAREGLY B:44 , GLY B:45 , GLY B:46 , SER B:114 , LEU B:115 , GLY B:154 , LEU B:158 , PHE B:173 , MET B:177 , VAL B:243 , HIS B:269 , TRP B:270binding site for residue 6OR B 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5JZ9)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Asp A:150 -Pro A:151
2Asp B:150 -Pro B:151

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JZ9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5JZ9)

(-) Exons   (0, 0)

(no "Exon" information available for 5JZ9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:284
                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhheeeeeee...eeeeeeeee......eeeee.......hhhhhh..hhhhhhh..eeeee...............hhhhhhhhhhhhhhhhhh...eeeeeehhhhhhhhhhhhhh...eeeeeee..............hhhhhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhh..eeeeee.....hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jz9 A   7 LTFESTSRFAEVDVDGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGGG 290
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286    


Chain B from PDB  Type:PROTEIN  Length:284
                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhheeeeeee...eeeeeeeee.....eeeeee.......hhhhhh..hhhhhhh.eeeeee...............hhhhhhhhhhhhhhhhhh...eeeeeehhhhhhhhhhhhhh...eeeeeee..............hhhhhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhh..eeeeee.....hhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jz9 B   7 LTFESTSRFAEVDVDGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGGG 290
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JZ9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JZ9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JZ9)

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)

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  HSAD_MYCTO | P9WNH4
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HSAD_MYCTO | P9WNH4: 2vf2 2wud 2wue 2wuf 2wug

(-) Related Entries Specified in the PDB File

2vf2 APO ENZYME