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(-) Description

Title :  METAL ABC TRANSPORTER FROM LISTERIA MONOCYTOGENES WITH CADMIUM
 
Authors :  J. Osipiuk, M. Zhou, S. Grimshaw, W. F. Anderson, A. Joachimiak, Center Structural Genomics Of Infectious Diseases (Csgid)
Date :  03 May 16  (Deposition) - 11 May 16  (Release) - 11 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.72
Chains :  Asym./Biol. Unit :  A
Keywords :  Abc Transporter, Cadmium, Structural Genomics, Idp02508, Center For Structural Genomics Of Infectious Diseases, Csgid, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Osipiuk, M. Zhou, S. Grimshaw, W. F. Anderson, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Metal Abc Transporter From Listeria Monocytogenes With Cadmium
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MANGANESE-BINDING LIPOPROTEIN MNTA
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG53
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MNTA, LMO1847
    Organism Scientific: LISTERIA MONOCYTOGENES SEROVAR 1/2A
    Organism Taxid: 169963
    Strain: ATCC BAA-679 / EGD-E

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 15)

Asymmetric/Biological Unit (3, 15)
No.NameCountTypeFull Name
1CD9Ligand/IonCADMIUM ION
2CL1Ligand/IonCHLORIDE ION
3MSE5Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:67 , HIS A:140 , GLU A:206 , ASP A:281binding site for residue CD A 501
02AC2SOFTWAREASP A:65 , HOH A:602 , HOH A:615 , HOH A:774 , HOH A:776 , HOH A:798binding site for residue CD A 502
03AC3SOFTWAREGLU A:118 , HOH A:694 , HOH A:759 , HOH A:786 , HOH A:795 , HOH A:809binding site for residue CD A 503
04AC4SOFTWAREASP A:291 , GLU A:295 , HOH A:617 , HOH A:789 , HOH A:793binding site for residue CD A 504
05AC5SOFTWAREASP A:70 , HOH A:603 , HOH A:674 , HOH A:681 , HOH A:763 , HOH A:777binding site for residue CD A 505
06AC6SOFTWAREASP A:165 , ASN A:198 , HOH A:782binding site for residue CD A 506
07AC7SOFTWAREHIS A:57 , SER A:78 , GLU A:264 , HOH A:779 , HOH A:783 , HOH A:805binding site for residue CD A 507
08AC8SOFTWAREASP A:81 , HOH A:764 , HOH A:785 , HOH A:799 , HOH A:808binding site for residue CD A 508
09AC9SOFTWAREASP A:306binding site for residue CD A 509
10AD1SOFTWARELYS A:126 , TYR A:127binding site for residue CL A 510

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5JPD)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5JPD)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JPD)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5JPD)

(-) Exons   (0, 0)

(no "Exon" information available for 5JPD)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:280
                                                                                                                                                                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeehhhhhhhhhhhh..eeeeeee...........hhhhhhhhhhh.eeee......hhhhhhhhhhhhh.........eee.....................hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeeee..hhhhhhhhh.eeeeee........hhhhhhhhhhhhhhh....eeee....hhhhhhhhhhhh..eeeee.............hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jpd A  31 GKLNVVATYSILADIVKNVGGNKIELHSIVPVGVDPHEYDPLPANIQSAADADLIFYNGLNLETGNGWFDRmLETADKSREDKNQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALVKADPDNADFYKENAKKYIDKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYIWEINTESQGTPDQmKQIVGIVEKEKVPNLFVETSVDPRSmESVSKETGVPIFAKIFTDSTAKKGEVGDTYLEmmRYNLDKIHDGLAK 310
                                    40        50        60        70        80        90       100 |     110       120       130       140       150       160       170       180       190       200       210       220       230      |240       250       260  |    270       280       290     ||300       310
                                                                                                 102-MSE                                                                                                                                237-MSE                   263-MSE                          296-MSE          
                                                                                                                                                                                                                                                                                                    297-MSE
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JPD)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JPD)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JPD)

(-) Gene Ontology  (7, 7)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MNTA_LISMO | Q8Y653: 5hx7 5i4k

(-) Related Entries Specified in the PDB File

5hx7 METAL ABC TRANSPORTER FROM LISTERIA MONOCYTOGENES
5i4k METAL ABC TRANSPORTER FROM LISTERIA MONOCYTOGENES WITH MANGANESE RELATED ID: CSGID-IDP02508 RELATED DB: TARGETTRACK