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(-) Description

Title :  STRUCTURE OF CANDIDA ALBICANS TREHALOSE-6-PHOSPHATE SYNTHASE IN COMPLEX WITH UDP-GLUCOSE
 
Authors :  Y. Miao, R. G. Brennan
Date :  27 Jan 16  (Deposition) - 03 May 17  (Release) - 03 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A (1x),B (1x)
Biol. Unit 2:  A,B  (2x)
Keywords :  Trehalose-6-Phosphate Synthase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Miao, R. G. Brennan
Structure Of Candida Albicans Trehalose-6-Phosphate Synthas In Complex With Udp-Glucose
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING]
    Chains: A, B
    EC Number: 2.4.1.15
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: TPS1, CAO19.13961, CAO19.6640
    Organism Common: YEAST
    Organism Scientific: CANDIDA ALBICANS (STRAIN SC5314 / ATCC MYA- 2876)
    Organism Taxid: 237561
    Strain: SC5314 / ATCC MYA-2876
    Synonym: TREHALOSE-6-PHOSPHATE SYNTHASE,UDP-GLUCOSE-GLUCOSEPHOSPHATE GLUCOSYLTRANSFERASE

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A (1x)B (1x)
Biological Unit 2 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

Asymmetric Unit (2, 4)
No.NameCountTypeFull Name
1SO42Ligand/IonSULFATE ION
2UPG2Ligand/IonURIDINE-5'-DIPHOSPHATE-GLUCOSE
Biological Unit 1 (2, 2)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION
2UPG1Ligand/IonURIDINE-5'-DIPHOSPHATE-GLUCOSE
Biological Unit 2 (2, 8)
No.NameCountTypeFull Name
1SO44Ligand/IonSULFATE ION
2UPG4Ligand/IonURIDINE-5'-DIPHOSPHATE-GLUCOSE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP A:98 , HIS A:171 , HIS A:202 , ARG A:280 , LYS A:285 , VAL A:315 , SER A:356 , ILE A:357 , LEU A:362 , ASP A:379 , GLY A:380 , MET A:381 , ASN A:382 , LEU A:383 , VAL A:384 , GLU A:387 , HOH A:647 , HOH A:698 , HOH A:702 , HOH A:731 , HOH A:738 , HOH A:743 , HOH A:790binding site for residue UPG A 501
2AC2SOFTWARETYR A:89 , SER A:317 , ARG A:318 , HOH A:695binding site for residue SO4 A 502
3AC3SOFTWARETRP B:98 , HIS B:171 , HIS B:202 , ARG B:280 , LYS B:285 , VAL B:315 , SER B:356 , ILE B:357 , LEU B:362 , ASP B:379 , GLY B:380 , MET B:381 , ASN B:382 , LEU B:383 , VAL B:384 , GLU B:387 , HOH B:630 , HOH B:674 , HOH B:707 , HOH B:718 , HOH B:723 , HOH B:773 , HOH B:783binding site for residue UPG B 501
4AC4SOFTWARETYR B:89 , SER B:317 , ARG B:318 , HOH B:744 , HOH B:774binding site for residue SO4 B 502

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5HUT)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric Unit
No.Residues
1Asn A:22 -Gly A:23
2Gln A:39 -Gly A:40
3Lys A:43 -Thr A:44
4Ser B:31 -Gly B:32
5Gln B:39 -Gly B:40
6Lys B:43 -Thr B:44

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5HUT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5HUT)

(-) Exons   (0, 0)

(no "Exon" information available for 5HUT)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:469
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee..eeeee.....eeeee..hhhhhhh.........eeeee.....hhhhhhhhhhhhhhhhheee...hhhhhhhhhh.....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhh......eeeee......hhhhhh...hhhhhhhhhh...eeee.hhhhhhhhhhhhhhhh..eee...eeee..eeeeeee.....hhhhhhhhh.hhhhhhhhhhhhhhh...eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhh......eeee....hhhhhhhhhhhh.eeee........hhhhhhhhh......eeeee..hhhhhh....eee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hut A   4 GKVLVVSNRIPVTIKRLDNGSYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTKVNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYHPGEMNFDENAWAAYIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSSEIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISIGAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVFLNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSIPFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLNGALIVNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNP 472
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463         


Chain B from PDB  Type:PROTEIN  Length:464
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee..eeee..eeee...hhhhhh........eeeeee........hhhhhhhhhhhhhheee...hhhhhhhhhh.....hhhhhhh.hhhhh..hhhhhhhhhhhhhhhhhhhhh......eeeee.hhhhhhhhhhhhhhh......eeeee......hhhhhh...hhhhhhhhhh...eeee.hhhhhhhhhhhhhhhh..eee...eeee..eeeeeee.....hhhhhhhhh.hhhhhhhhhhhhhhh...eeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhh......eeee....hhhhhhhhhhhh.eeee........hhhhhhhhh......eeeee..hhhhhh....eee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hut B   4 GKVLVVSNRIPVTIKRYDYSMSSGGLVTALQGLKKTTEFQWYGWPGLEIPEDEQTKVNDELKSKFNCTAIFLSDTIADLHYNGFSNSILWPLFHYHPGEMNFDENAWAAYIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPEMLRQEIGNKKKNIKIGFFLHTPFPSSEIYRILPVRKEILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNGIKYQGRSISIGAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVKVIVGVDRLDYIKGVPQKLHAFEVFLNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSIPFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQDRKGVLILSEFAGAAQSLNGALIVNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTYISKYTSGFWGESFVKELYKCNP 472
                                    13     || 28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468    
                                          19|                                                                                                                                                                                                                                                                                                                                                                                                                                                               
                                           25
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5HUT)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5HUT)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5HUT)

(-) Gene Ontology  (10, 10)

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        TPS1_CANAL | Q92410: 5huu 5huv 5hvl

(-) Related Entries Specified in the PDB File

5hus 5huu 5huv