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(-) Description

Title :  CRYSTAL STRUCTURE OF PQS RESPONSE PROTEIN PQSE IN COMPLEX WITH 2-(PYRIDIN-3-YL)BENZOIC ACID
 
Authors :  F. Witzgall, W. Blankenfeldt
Date :  12 Jan 16  (Deposition) - 27 Apr 16  (Release) - 29 Jun 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.99
Chains :  Asym./Biol. Unit :  A
Keywords :  Quorum Sensing, Pqs, Pqse, Inhibitor, Pseudomonas, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Zender, F. Witzgall, S. L. Drees, E. Weidel, C. K. Maurer, S. Fetzner W. Blankenfeldt, M. Empting, R. W. Hartmann
Dissecting The Multiple Roles Of Pqse In Pseudomonas Aeruginosa Virulence By Discovery Of Small Tool Compounds.
Acs Chem. Biol. V. 11 1755 2016
PubMed-ID: 27082157  |  Reference-DOI: 10.1021/ACSCHEMBIO.6B00156

(-) Compounds

Molecule 1 - PQSE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET19M
    Expression System Vector Type: PLASMID
    Gene: PA1000
    Organism Scientific: PSEUDOMONAS AERUGINOSA PAO1
    Organism Taxid: 208964

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
161O1Ligand/Ion2-(PYRIDIN-3-YL)BENZOIC ACID
2FE2Ligand/IonFE (III) ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:69 , HIS A:71 , HIS A:159 , ASP A:178 , FE A:402 , 61O A:403 , HOH A:511binding site for residue FE A 401
2AC2SOFTWAREASP A:73 , HIS A:74 , ASP A:178 , HIS A:221 , FE A:401 , 61O A:403 , HOH A:511binding site for residue FE A 402
3AC3SOFTWAREHIS A:71 , TYR A:72 , ASP A:73 , HIS A:159 , ASP A:178 , LEU A:193 , PHE A:195 , HIS A:221 , LEU A:277 , SER A:285 , FE A:401 , FE A:402 , HOH A:511binding site for residue 61O A 403

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:82 -A:127

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5HIP)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5HIP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5HIP)

(-) Exons   (0, 0)

(no "Exon" information available for 5HIP)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:298
                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...eeee..eeee......eeeeeee..eeeee...hhhhhhhhhhhhhhhh.hhh.eeeee..........hhhhhhhhh...eeeeehhhhhhhhhhhhhhhhhhhhhh............hhhhh.eeee....eeeee..eeeeeee........eeeee....eeeee....ee......ee.....hhhhhhhhhhhhhh.....eeee....eeehhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hip A   0 HMLRLSAPGQLDDDLCLLGDVQVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDVRRRRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESLERLQRLPTLLQLIPGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMGESLDELSEELHRAWGGQSVDFLPGELHLGSMRRMLEILSRQA 297
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5HIP)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5HIP)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5HIP)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Y1000_PSEAE | P20581: 2q0i 2q0j 2vw8 3dh8 5hio 5hiq 5his

(-) Related Entries Specified in the PDB File

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