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(-) Description

Title :  TRUNCATED MITOFUSIN-1, GDP-BOUND
 
Authors :  Y. L. Cao, S. Gao
Date :  26 Jul 16  (Deposition) - 25 Jan 17  (Release) - 08 Mar 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A
Keywords :  Hydrolase, Mitochondrial Fusion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. L. Cao, S. Meng, Y. Chen, J. X. Feng, D. D. Gu, B. Yu, Y. J. Li, J. Y. Yang, S. Liao, D. C. Chan, S. Gao
Mfn1 Structures Reveal Nucleotide-Triggered Dimerization Critical For Mitochondrial Fusion
Nature V. 542 372 2017
PubMed-ID: 28114303  |  Reference-DOI: 10.1038/NATURE21077

(-) Compounds

Molecule 1 - MITOFUSIN-1
    Chains: A
    EC Number: 3.6.5.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 696-741
    Gene: MFN1
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: FZO HOMOLOG,TRANSMEMBRANE GTPASE MFN1,FZO HOMOLOG, TRANSMEMBRANE GTPASE MFN1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1GDP1Ligand/IonGUANOSINE-5'-DIPHOSPHATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:85 , SER A:86 , GLY A:87 , LYS A:88 , SER A:89 , SER A:90 , GLY A:106 , ASN A:237 , ARG A:238 , ASP A:240 , SER A:284 , ALA A:285 , LYS A:286 , HOH A:1004 , HOH A:1019 , HOH A:1058 , HOH A:1067 , HOH A:1129binding site for residue GDP A 901

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:111 -A:156

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5GOE)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5GOE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5GOE)

(-) Exons   (0, 0)

(no "Exon" information available for 5GOE)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:384
                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhh..eeeeee.....hhhhhhhhhhh......hhhhhh..eeeeeee.....eee........hhhhhhhhh..eeeeeee...hhhhhh.eeeee..hhhhh.hhhhhhh....eeeeeee.....hhhhhhhhhhhhhhh...eeeeeeehhhhhh.hhhhhhhhhhhhhhhhhhhhhh.....hhhhhh..eee.hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5goe A   4 PVSPLKHFVLAKKAITAIFDQLLEFVTEGSHFVEATYKNPELDRIATEDDLVEMQGYKDKLSIIGEVLSRRHMKVAFFGRTSSGKSSVINAMLWDKVLPSGIGHITNCFLSVEGTDGDKAYLMTEGSDEKKSVKTVNQLAGCLVRVFWPKAKCALLRDDLVLVDSPGTDVTDSWIDKFCLDADVFVLVANSESTLMNTEKHFFHKVNERLSKPNIFILNNRWDASASEPEYMEDVRRQHMERCLHFLVEELKVVNALEAQNRIFFVSAKEVLSARKQKAALAEGFHARLQEFQNFEQIFEECISQSAVKTKFEQHTIRAKQILATVKNIMDSVNLAAEDKRHYSARLPKEIDQLEKIQNNSKLLRNKAVQLENELENFTKQFLP 735
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143|      164       174       184||     197       207       217       227       237       247       257       267       277       287       305       315       325       335       345       355       365   ||  701       711       721       731    
                                                                                                                                                                     143|                           185|                                                                                                        296|                                                             369|                                       
                                                                                                                                                                      155                            189                                                                                                         305                                                              696
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5GOE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5GOE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5GOE)

(-) Gene Ontology  (12, 12)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MFN1_HUMAN | Q8IWA4: 5gnr 5gns 5gnt 5gnu 5go4 5gof 5gom

(-) Related Entries Specified in the PDB File

5gof 5gom