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(-) Description

Title :  HUMAN SPECTRIN SH3 DOMAIN D48G, E7A, K60A
 
Authors :  P. Gallego, S. Navarro, S. Ventura, D. Reverter
Date :  12 Feb 16  (Deposition) - 28 Dec 16  (Release) - 28 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Protein, Spectrin Sh3 (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Navarro, P. Gallego, M. Diaz, S. Ventura, D. Reverter
Human Spectrin Sh3 Domain D48G, E7A, K60A
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SPECTRIN ALPHA CHAIN, NON-ERYTHROCYTIC 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: SH3, RESIDUES 965-1022
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: ALPHA-II SPECTRIN, FODRIN ALPHA CHAIN, SPECTRIN, NON-ERYTHROID ALPHA SUBUNIT, HUMAN SPECTRIN SH3

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1EDO2Ligand/Ion1,2-ETHANEDIOL
2NH41Ligand/IonAMMONIUM ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:6 , SER A:19 , GLU A:22 , TRP A:41 , ASP A:62 , HOH A:2007BINDING SITE FOR RESIDUE EDO A 63
2AC2SOFTWAREGLU A:17 , VAL A:23 , THR A:24 , ARG A:49BINDING SITE FOR RESIDUE NH4 A 64
3AC3SOFTWARELEU A:34 , ASN A:35 , HOH A:2032BINDING SITE FOR RESIDUE EDO A 65

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5FWC)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5FWC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5FWC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5FWC)

(-) Exons   (0, 0)

(no "Exon" information available for 5FWC)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:57
                                                                                        
               SCOP domains --------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..................eeeeee.....eeeeee..eeeeee...eee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------- Transcript
                  5fwc A  6 KALVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNGRQGFVPAAYVKALD 62
                                    15        25        35        45        55
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FWC)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FWC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FWC)

(-) Gene Ontology  (28, 28)

Asymmetric/Biological Unit(hide GO term definitions)

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  SPTN1_HUMAN | Q13813
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  SPTN1_HUMAN | Q13813
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SPTN1_HUMAN | Q13813: 2fot 3f31 3fb2 5fw9 5fwb

(-) Related Entries Specified in the PDB File

5fw6 STRUCTURE OF HUMAN TRANSTHYRETIN MUTANT A108V
5fw7 STRUCTURE OF HUMAN TRANSTHYRETIN MUTANT A109V
5fw8 STRUCTURE OF HUMAN TRANSTHYRETIN MUTANT E89K
5fw9 HUMAN SPECTRIN SH3 DOMAIN D48G, E7Y, K60Y
5fwb HUMAN SPECTRIN SH3 DOMAIN D48G, E7F, K60F