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(-) Description

Title :  CRYSTAL STRUCTURE OF APO HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE FROM LEGIONELLA PNEUMOPHILA
 
Authors :  N. Zhang, X. Gong, M. Lu, X. Chen, X. Qin, H. Ge
Date :  17 Nov 15  (Deposition) - 30 Mar 16  (Release) - 18 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Hypoxanthine-Guanine Phosphoribosyltransferase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Zhang, X. Gong, M. Lu, X. Chen, X. Qin, H. Ge
Crystal Structures Of Apo And Gmp Bound Hypoxanthine-Guanin Phosphoribosyltransferase From Legionella Pneumophila And The Implications In Gouty Arthritis
J. Struct. Biol. V. 194 311 2016
PubMed-ID: 26968365  |  Reference-DOI: 10.1016/J.JSB.2016.03.007

(-) Compounds

Molecule 1 - PURINE/PYRIMIDINE PHOSPHORIBOSYLTRANSFERASE
    Chains: A, B
    EC Number: 2.4.2.8
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: LPG1519
    Organism Scientific: LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA STRAIN PHILADELPHIA 1
    Organism Taxid: 272624
    Strain: PHILADELPHIA 1
    Synonym: HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1PO41Ligand/IonPHOSPHATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:11 , SER A:14 , PHE A:179binding site for residue PO4 A 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5ESW)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Met A:49 -Val A:50
2Met B:49 -Val B:50

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5ESW)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5ESW)

(-) Exons   (0, 0)

(no "Exon" information available for 5ESW)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:190
                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhheeeeehhhhhhhhhhhhhhhhhhhh....eeeee...hhhhhhhhhh......eeeeeeee...........eeee..hhhhh..eeeeeeeee..hhhhhhhhhhhhhh...eeeeeeeeee.............eeeeee....ee..............eeee........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5esw A  -1 HHMTIPDKIKAVYEKSTCLYTSNEVEAALDRMAIKIHETLQDKNPVIICVMVGGLVPLGNLLHRLDFPLEVDYVHATRYRGDLTGGDILWKVRPSSNLAGRTVLVVDDILDGGITLAAIINEIKAMGAAEVYSAVLVDKYRKRVPNGLQKADFVGLQVEDHYIFGYGMDYHEYLRNAPGIFIVHPDHEAS 188
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188


Chain B from PDB  Type:PROTEIN  Length:189
                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhheeeeehhhhhhhhhhhhhhhhhhhh....eeeee...hhhhhhhhhh......eeeeeeee...........eeee..hhhhh..eeeeeeeee..hhhhhhhhhhhhhh...eeeeeeeeee.............eeeeee....ee..............eeee.hhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5esw B   0 HMTIPDKIKAVYEKSTCLYTSNEVEAALDRMAIKIHETLQDKNPVIICVMVGGLVPLGNLLHRLDFPLEVDYVHATRYRGDLTGGDILWKVRPSSNLAGRTVLVVDDILDGGITLAAIINEIKAMGAAEVYSAVLVDKYRKRVPNGLQKADFVGLQVEDHYIFGYGMDYHEYLRNAPGIFIVHPDHEAS 188
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5ESW)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5ESW)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5ESW)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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