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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN NUCLEOPHOSMIN-CORE IN COMPLEX WITH CYTOCHROME C
 
Authors :  N. Bernardo-Garcia, J. A. Hermoso, K. Gonzalez-Arzola, I. Diaz-Moren La Rosa
Date :  28 Oct 15  (Deposition) - 09 Nov 16  (Release) - 09 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.55
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,a,b,c,d,e,f,g,h,i,j
Biol. Unit 1:  A,B,C,D,E  (1x)
Biol. Unit 2:  F,G,H,I,J  (1x)
Biol. Unit 3:  a,b,c,d,e  (1x)
Biol. Unit 4:  f,g,h,i,j  (1x)
Keywords :  Nucleolus, Histone Assembly, Citochrome C, Apoptosis, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Bernardo-Garcia, J. A. Hermoso, K. Gonzalez-Arzola, I. Diaz-Moreno, M. A. De La Rosa
Crystal Structure Of Human Nucleophosmin-Core In Complex With Cytochrome C
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - NUCLEOPHOSMIN
    Chains: A, B, C, D, E, F, G, H, I, J, a, b, c, d, e, f, g, h, i, j
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET21A
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: NPM1, NPM
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: NPM,NUCLEOLAR PHOSPHOPROTEIN B23,NUCLEOLAR PROTEIN NO38, NUMATRIN

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920
Asymmetric Unit : ABCDEFGHIJabcdefghij
Biological Unit 1 (1x): ABCDE               
Biological Unit 2 (1x):      FGHIJ          
Biological Unit 3 (1x):           abcde     
Biological Unit 4 (1x):                fghij

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1CL4Ligand/IonCHLORIDE ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL H:83binding site for residue CL G 201
2AC2SOFTWAREVAL f:83 , VAL j:83binding site for residue CL f 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5EHD)

(-) Cis Peptide Bonds  (50, 50)

Asymmetric Unit
No.Residues
1Pro A:96 -Pro A:97
2Gly A:107 -Pro A:108
3Phe B:31 -Lys B:32
4Pro B:96 -Pro B:97
5Gly B:107 -Pro B:108
6Pro C:96 -Pro C:97
7Gly C:107 -Pro C:108
8Pro D:96 -Pro D:97
9Gly D:107 -Pro D:108
10Pro E:96 -Pro E:97
11Gly E:107 -Pro E:108
12Pro F:96 -Pro F:97
13Gly F:107 -Pro F:108
14Pro G:96 -Pro G:97
15Gly G:107 -Pro G:108
16Lys H:32 -Val H:33
17Pro H:96 -Pro H:97
18Gly H:107 -Pro H:108
19Pro I:96 -Pro I:97
20Gly I:107 -Pro I:108
21Pro J:96 -Pro J:97
22Gly J:107 -Pro J:108
23Pro a:96 -Pro a:97
24Gly a:107 -Pro a:108
25Pro b:96 -Pro b:97
26Gly b:107 -Pro b:108
27Lys c:32 -Val c:33
28Asn c:35 -Asp c:36
29Pro c:96 -Pro c:97
30Gly c:107 -Pro c:108
31Arg d:13 -Pro d:14
32Pro d:96 -Pro d:97
33Gly d:107 -Pro d:108
34Ala d:118 -Val d:119
35Pro e:96 -Pro e:97
36Gly e:107 -Pro e:108
37Pro f:96 -Pro f:97
38Gly f:107 -Pro f:108
39Lys g:32 -Val g:33
40Pro g:96 -Pro g:97
41Gly g:107 -Pro g:108
42Pro h:96 -Pro h:97
43Gly h:107 -Pro h:108
44Val i:33 -Asp i:34
45Glu i:37 -Asn i:38
46Pro i:96 -Pro i:97
47Gly i:107 -Pro i:108
48Phe j:31 -Lys j:32
49Pro j:96 -Pro j:97
50Gly j:107 -Pro j:108

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EHD)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5EHD)

(-) Exons   (0, 0)

(no "Exon" information available for 5EHD)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd A  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain B from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 5ehd B  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVA 118
                                    23        33        43        53        63        73        83        93       103       113     


Chain C from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....ee........eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd C  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       


Chain D from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 5ehd D  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVA 118
                                    23        33        43        53        63        73        83        93       103       113     


Chain E from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee.....eee.........eeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd E  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain F from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd F  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       


Chain G from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd G  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain H from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....ee.........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee....eeeeee....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd H  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       


Chain I from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....ee........eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee....eeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd I  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       


Chain J from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd J  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 120
                                    23        33        43        53        63        73        83        93       103       113       


Chain a from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd a  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain b from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 5ehd b  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVA 118
                                    23        33        43        53        63        73        83        93       103       113     


Chain c from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd c  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain d from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd d  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       


Chain e from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....ee........eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee....eeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd e  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       


Chain f from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd f  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain g from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd g  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      


Chain h from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd h  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVA 118
                                    22        32        42        52        62        72        82        92       102       112      


Chain i from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd i  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       


Chain j from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd j  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVA 118
                                    22        32        42        52        62        72        82        92       102       112
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5EHD)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5EHD)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5EHD)

(-) Gene Ontology  (53, 53)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
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  Cis Peptide Bonds
    Ala d:118 - Val d:119   [ RasMol ]  
    Arg d:13 - Pro d:14   [ RasMol ]  
    Asn c:35 - Asp c:36   [ RasMol ]  
    Glu i:37 - Asn i:38   [ RasMol ]  
    Gly A:107 - Pro A:108   [ RasMol ]  
    Gly B:107 - Pro B:108   [ RasMol ]  
    Gly C:107 - Pro C:108   [ RasMol ]  
    Gly D:107 - Pro D:108   [ RasMol ]  
    Gly E:107 - Pro E:108   [ RasMol ]  
    Gly F:107 - Pro F:108   [ RasMol ]  
    Gly G:107 - Pro G:108   [ RasMol ]  
    Gly H:107 - Pro H:108   [ RasMol ]  
    Gly I:107 - Pro I:108   [ RasMol ]  
    Gly J:107 - Pro J:108   [ RasMol ]  
    Gly a:107 - Pro a:108   [ RasMol ]  
    Gly b:107 - Pro b:108   [ RasMol ]  
    Gly c:107 - Pro c:108   [ RasMol ]  
    Gly d:107 - Pro d:108   [ RasMol ]  
    Gly e:107 - Pro e:108   [ RasMol ]  
    Gly f:107 - Pro f:108   [ RasMol ]  
    Gly g:107 - Pro g:108   [ RasMol ]  
    Gly h:107 - Pro h:108   [ RasMol ]  
    Gly i:107 - Pro i:108   [ RasMol ]  
    Gly j:107 - Pro j:108   [ RasMol ]  
    Lys H:32 - Val H:33   [ RasMol ]  
    Lys c:32 - Val c:33   [ RasMol ]  
    Lys g:32 - Val g:33   [ RasMol ]  
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    Pro i:96 - Pro i:97   [ RasMol ]  
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 Related Entries

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        NPM_HUMAN | P06748: 2llh 2p1b 2vxd

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