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(-) Description

Title :  CRYSTAL OF AMTR FROM CORYNEBACTERIUM GLUTAMICUM
 
Authors :  C. Palanca, V. Rubio
Date :  24 Sep 15  (Deposition) - 13 Jan 16  (Release) - 30 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.25
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Tetr Family Regulator, Dna Binding Protein, Nitrogen Master Regulator, Pii, Glnk, Glnb, Tfr (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Palanca, V. Rubio
Structure Of Amtr, The Global Nitrogen Regulator Of Corynebacterium Glutamicum, In Free And Dna-Bound Forms.
Febs J. V. 283 1039 2016
PubMed-ID: 26744254  |  Reference-DOI: 10.1111/FEBS.13643

(-) Compounds

Molecule 1 - TETR FAMILY TRANSCRIPTIONAL REGULATOR
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PLIC-SGC1
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: KIQ_008455
    Organism Scientific: CORYNEBACTERIUM GLUTAMICUM ATCC 14067
    Organism Taxid: 1079988

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric Unit (1, 5)
No.NameCountTypeFull Name
1SO45Ligand/IonSULFATE ION
Biological Unit 1 (1, 10)
No.NameCountTypeFull Name
1SO410Ligand/IonSULFATE ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:40 , SER A:41 , THR A:42 , LYS A:63 , HOH A:404binding site for residue SO4 A 301
2AC2SOFTWARESER A:41 , HIS A:43 , GLN A:44binding site for residue SO4 A 302
3AC3SOFTWAREARG A:171binding site for residue SO4 A 303
4AC4SOFTWAREILE A:51 , ARG A:52 , SER A:55binding site for residue SO4 A 304
5AC5SOFTWAREARG A:171 , ASN A:172 , ASP A:173binding site for residue SO4 A 305

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5DXZ)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 5DXZ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:199
                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhh....hhhhhhhhhh.hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh................hhhhhhhhhhhhhh.......hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5dxz A  19 NPREEILDASAELFTHQGFATTSTHQIADAVGIRQASLYYHFPSKTEIFLTLLKSTVEPSTVLAEDLAGPEMRLWAIVASEVRLLLSTKWNVGRLYQLPIVGSEEFAEYHSQREALTNIFRDLATEIVGDDPRAELPFHITMSVIEMRRNDGKIPSPLSADSLPETAIMLADASLAVLGASLPADRVEKTLELIKQADA 221
                                    28        38        48        58        68        78      ||92       102       112       122       132       142       152       162       172       182       192       202       212         
                                                                                             85|                                                                                                                                   
                                                                                              90
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5DXZ)

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 Related Entries

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UniProtKB/TrEMBL
        A0A072Z681_C | A0A072Z681: 5dy0 5dy1

(-) Related Entries Specified in the PDB File

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