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(-) Description

Title :  CRYSTAL STRUCTURE OF SORTASE E1 FROM STREPTOMYCES COELICOLOR WITH TRIPEPTIDE IN THE ACTIVE SITE
 
Authors :  M. D. Kattke, D. Cascio, M. R. Sawaya, R. T. Clubb
Date :  25 Jul 15  (Deposition) - 17 Aug 16  (Release) - 17 Aug 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.89
Chains :  Asym./Biol. Unit :  A
Keywords :  Sortase, Class E, Srte, Transpeptidase, Aminoacyltransferase, Cysteine Endopeptidase, Bacterial Protein, Protein Binding, Catalytic Domain, Beta Barrel, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. D. Kattke, D. Cascio, M. R. Sawaya, M. A. Elliot, R. T. Clubb
Crystal Structure Of The First Class E Sortase Transpeptidase, Srte1 From Streptomyces Coelicolor
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SRTE1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-15B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 162-352
    Gene: SCO3850
    Organism Scientific: STREPTOMYCES COELICOLOR (STRAIN ATCC BAA-471 / A3(2) / M145)
    Organism Taxid: 100226
    Strain: ATCC BAA-471 / A3(2) / M145
    Synonym: PUTATIVE INTEGRAL MEMBRANE PROTEIN

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:196 , PRO A:210binding site for residue GOL A 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5CUW)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Thr A:321 -Pro A:322

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 5CUW)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:162
                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......eeeeeeehhhheeeeeee......hhhhh.eee...............eeeeee...........hhhhh....eeeee...eeeeeeeeeeeeee...hhhhhh............eeeeeeeee......eeeeeeeeeeeeee.hhh.hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5cuw A 168 AQAPGQGFALLHIPKLDVVVPIAEGISSKKVLDRGMVGHYAEDGLKTAMPDAKAGNFGLAGHRNTHGEPFRYINKLEPGDPIVVETQDKYFVYKMASILPVTSPSNVSVLDPVPKQSGFKGPGRYITLTTCTPEFTSKYRMIVWGKMVEERPRSKGKPDALV 351
                              ||   199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349  
                              ||                                                                                                                                                              
                            170|                                                                                                                                                              
                             193
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5CUW)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5CUW)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)

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