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(-) Description

Title :  CRYSTAL STRUCTURE OF HEME BINDING PROTEIN HMUT
 
Authors :  N. Muraki, S. Aono
Date :  18 Sep 15  (Deposition) - 18 Nov 15  (Release) - 18 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.42
Chains :  Asym./Biol. Unit :  A
Keywords :  Heme, Abc Transporter, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Muraki, S. Aono
Structural Basis For Heme Recognition By Hmut Responsible For Heme Transport To The Heme Transporter In Corynebacterium Glutamicum
Chem Lett. 2015
PubMed: search  |  Reference-DOI: 10.1246/CL.150894

(-) Compounds

Molecule 1 - ABC-TYPE TRANSPORTER, PERIPLASMIC COMPONENT
    Atcc: 13032
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET22B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 24-359
    Gene: CGL0389
    Organism Scientific: CORYNEBACTERIUM GLUTAMICUM ATCC 13032
    Organism Taxid: 196627
    Strain: ATCC 13032
    Synonym: HMUT

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:87 , LEU A:101 , TYR A:102 , VAL A:123 , SER A:124 , GLY A:140 , HIS A:141 , TYR A:240 , ARG A:242 , PHE A:249 , TYR A:255 , MET A:297 , GLU A:299 , ASP A:332 , LEU A:336 , HOH A:584binding site for residue HEM A 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5AZ3)

(-) Cis Peptide Bonds  (2, 3)

Asymmetric/Biological Unit
No.Residues
1Leu A:76 -Pro A:77
2Gly A:163 -Pro A:164

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5AZ3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5AZ3)

(-) Exons   (0, 0)

(no "Exon" information available for 5AZ3)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:309
                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh..eee...................eeee.....eeee.....eeee...hhhhhhhhhh.hhhhh........hhhhh.....ee...eehhhhhhhh...eeee.....hhhhhhhhhhh...eee.....hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeee......eeee.hhhhhhhhhhhh..eehhhhh....eee.hhhhhhhhh..eeeeehhhhhhhhhhhhhh.......hhhhhh..eeeehhhhhh.hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5az3 A  48 TDPRTFTGLSIVEDIGDVVPVTDNASPALPVSLTDADGNDVVVEDVSRILPLDLYGTYSKTIAGLGLVDNIVGRTVSSTEPALADTEVVTTGGHTLNAEAILNLHPTLVIIDHSIGPREVIDQIRAAGVATVIMSPQRSIASIGDDIRDIASVVGLPEEGEKLAERSVAEVEEASTVVDELTPEDPLKMVFLYARGTGGVFFILGDAYGGRDLIEGLGGVDMAAEKGIMDLAPANAEALAELNPDVFVMMSEGLVSTGGIDGLMERPGIAQTTAGQNQRVLALPDGQSLAFGAQTGELLLRASRELYVQ 356
                                    57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5AZ3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5AZ3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5AZ3)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 5AZ3)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8NTB8_CORGL | Q8NTB8: 5b4z 5b50 5b51

(-) Related Entries Specified in the PDB File

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