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(-) Description

Title :  STRUCTURE OF THE ENTIRE DYNEIN STALK REGION
 
Authors :  G. Kurisu, Y. Nishikawa, M. Inatomi
Date :  21 Aug 15  (Deposition) - 16 Dec 15  (Release) - 18 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.01
Chains :  Asym./Biol. Unit :  A
Keywords :  Microtubule, Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Nishikawa, M. Inatomi, H. Iwasaki, G. Kurisu
Structural Change In The Dynein Stalk Region Associated Wit Two Different Affinities For The Microtubule
J. Mol. Biol. V. 428 1886 2016
PubMed-ID: 26585405  |  Reference-DOI: 10.1016/J.JMB.2015.11.008

(-) Compounds

Molecule 1 - CYTOPLASMIC DYNEIN 1 HEAVY CHAIN 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET17B
    Expression System Taxid: 562
    Gene: DYNC1H1, DHC1, DNCH1, DNCHC1, DYHC
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: CYTOPLASMIC DYNEIN HEAVY CHAIN 1,DYNEIN HEAVY CHAIN, CYTOSOLIC

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5AYH)

(-) Sites  (0, 0)

(no "Site" information available for 5AYH)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5AYH)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5AYH)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5AYH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5AYH)

(-) Exons   (0, 0)

(no "Exon" information available for 5AYH)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:254
                                                                                                                                                                                                                                                                                               
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.hhhhhhhhhh....hhhhhhhhhhhhhhh.....hhhhhhhhhh..hhhhhhhh......hhhhhhhhhhhh......hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5ayh A 3219 DLRIKSQELEVKNAAANDKLKKMVKDQQEAEKKKVMSQEIQEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESICLLLGESTTDWKQIRSIIMRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLACGPMVKWAIAQLNYADMLKRVEPLRNELQKLEDDAKDNQQKANEVEQMIRDLEASIARYKEEYAVLISEAQAIKADLAAVEAKVNR 3472
                                  3228      3238      3248      3258      3268      3278      3288      3298      3308      3318      3328      3338      3348      3358      3368      3378      3388      3398      3408      3418      3428      3438      3448      3458      3468
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5AYH)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5AYH)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5AYH)

(-) Gene Ontology  (22, 22)

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  5ayh
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DYHC1_MOUSE | Q9JHU4: 3err 3j1t 3j1u 3wuq

(-) Related Entries Specified in the PDB File

3wuq THIS ENTRY IS THE C-TERMINAL TRUNCATION OF 3WUQ