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(-) Description

Title :  P. AERUGINOSA SDSA HEXAGONAL POLYMORPH
 
Authors :  E. De La Mora, E. Flores-Hernandez, J. Jakoncic, V. Stojanoff, N. Sanchez-Puig, A. Moreno
Date :  13 Feb 15  (Deposition) - 07 Oct 15  (Release) - 07 Oct 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Hydrolase, Sdsa Sulfatase Polymorphs (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. De La Mora, E. Flores-Hernandez, J. Jakoncic, V. Stojanoff, D. Siliqi, N. Sanchez-Puig, A. Moreno
Sdsa Polymorph Isolation And Improvement Of Their Crystal Quality Using Nonconventional Crystallization Techniques
J. Appl. Crystallogr. V. 48 1551 2015
PubMed: search  |  Reference-DOI: 10.1107/S1600576715016556

(-) Compounds

Molecule 1 - ALKYL SULFATASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Variant: C41
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287
    Synonym: SDSA ALKYLSULFATASE

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 5)

Asymmetric Unit (2, 5)
No.NameCountTypeFull Name
1GOL3Ligand/IonGLYCEROL
2ZN2Ligand/IonZINC ION
Biological Unit 1 (1, 6)
No.NameCountTypeFull Name
1GOL6Ligand/IonGLYCEROL
2ZN-1Ligand/IonZINC ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:173 , HIS A:174 , GLU A:299 , HIS A:344 , ZN A:1002 , HOH A:2192 , HOH A:2197BINDING SITE FOR RESIDUE ZN A1001
2AC2SOFTWAREHIS A:169 , HIS A:171 , GLU A:280 , GLU A:299 , ZN A:1001 , HOH A:2192BINDING SITE FOR RESIDUE ZN A1002
3AC3SOFTWAREGLY A:261 , GLU A:262 , ASP A:263 , THR A:272 , PHE A:273 , ARG A:332 , HOH A:2294BINDING SITE FOR RESIDUE GOL A1656
4AC4SOFTWAREGLN A:378 , GLY A:379 , GLN A:384 , ARG A:388 , ASP A:648 , THR A:651 , PRO A:652 , ALA A:653 , HOH A:2360 , HOH A:2564BINDING SITE FOR RESIDUE GOL A1657
5AC5SOFTWAREGLU A:40 , ASP A:396 , ARG A:402 , HOH A:2040 , HOH A:2128 , HOH A:2567BINDING SITE FOR RESIDUE GOL A1658

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5AIJ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5AIJ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5AIJ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5AIJ)

(-) Exons   (0, 0)

(no "Exon" information available for 5AIJ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:631
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhh....hhhhhhhhh.eee.....eee.....eeee.hhhhhhh........hhhhhhhhhhh...eeeeee..eeeee......eeeee....eeee....hhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhh.hhhhhhh...eeeee.hhhhhhhhhhh.hhhhhhhhhhhhh...............................eee...eeeeee..eeeeeee.........eeeee....eee.....................hhhhhhhhhhhhhhhhh....eee......eehhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh...hhhhhhhhhhh....hhhhhhhhhhhhhhh....hhhhh...hhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeee....eeeeeeee..eeeeee........eeeeehhhhhhhhhh...hhhhhhhh..eeeee..hhhhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5aij A  20 TTAPKPPSAFTVEAQRRVEAELPFADRADFERADRGLIRRPERLLIRNPDGSVAWQLGGYDFLLDGKPRDSINPSLQRQALLNLKYGLFEVAEGIYQVRGFDLANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTPGTESPAEMNIWLPRQKALLMAENVVGTLHNLYTLRGAEVRDALGWSKYINQALHRFGRQAEVMFAVHNWPRWGNAEIVEVLEKQRDLYGYLHDQTLHLANQGVTIGQVHNRLRLPPSLDQEWYDRGYHGSVSHNARAVLNRYLGYYDGNPATLDPLSPEDSAGRYVEYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAENAGWRNSYLSAAYELRHGVPRDQGSADALAAMDTGLLFDYLGVRLDAGAAEGKALSINLRLPDIGENYLLELKNSHLNNLRGVQSEDAGQTVSIDRADLNRLLLKEVSAVRLVFEGKLKSSGNPLLLGQLFGMLGDFDFWFDIVTPAAK 655
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519    || 534       544       554       564       574       584       594       604       614       624       634       644       654 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  524|                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   530
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5AIJ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5AIJ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5AIJ)

(-) Gene Ontology  (4, 4)

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  5aij
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 Related Entries

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UniProtKB/TrEMBL
        Q9I5I9_PSEAE | Q9I5I9: 2cfu 2cfz 2cg2 2cg3 5a23 5ajl

(-) Related Entries Specified in the PDB File

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