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(-) Description

Title :  STRUCTURE OF HUMAN NNOS R354A G357D MUTANT HEME DOMAIN IN COMPLEX WITH 7-((4-CHLORO-3-((METHYLAMINO)METHYL)PHENOXY) METHYL)QUINOLIN-2-AMINE
 
Authors :  H. Li, T. L. Poulos
Date :  20 Aug 15  (Deposition) - 28 Oct 15  (Release) - 25 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.98
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Oxidoreductase, Nitric Oxide Synthase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. A. Cinelli, H. Li, A. V. Pensa, S. Kang, L. J. Roman, P. Martasek, T. L. Poulos, R. B. Silverman
Phenyl Ether- And Aniline-Containing 2-Aminoquinolines As Potent And Selective Inhibitors Of Neuronal Nitric Oxide Synthase.
J. Med. Chem. V. 58 8694 2015
PubMed-ID: 26469213  |  Reference-DOI: 10.1021/ACS.JMEDCHEM.5B01330

(-) Compounds

Molecule 1 - NITRIC OXIDE SYNTHASE, BRAIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PCWORI
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 302-722
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: CONSTITUTIVE NOS, NC-NOS, NOS TYPE I, NEURONAL NOS, N-NOS, NNOS, PEPTIDYL-CYSTEINE S-NITROSYLASE NOS1, BNOS, NEURONAL NITRIC OXIDE SYNTHASE

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 9)

Asymmetric/Biological Unit (5, 9)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2H4B2Ligand/Ion5,6,7,8-TETRAHYDROBIOPTERIN
3HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
4XEB3Ligand/Ion7-[[4-CHLORANYL-3-(METHYLAMINOMETHYL)PHENOXY]METHYL]QUINOLIN-2-AMINE
5ZN1Ligand/IonZINC ION

(-) Sites  (9, 9)

Asymmetric Unit (9, 9)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP A:414 , ARG A:419 , CYS A:420 , PHE A:589 , SER A:590 , TRP A:592 , GLU A:597 , TRP A:683 , PHE A:709 , TYR A:711 , H4B A:760 , XEB A:800 , HOH A:2369 , HOH A:2370 , HOH A:2371BINDING SITE FOR RESIDUE HEM A 750
2AC2SOFTWARESER A:339 , MET A:341 , ARG A:601 , VAL A:682 , TRP A:683 , HEM A:750 , HOH A:2030 , HOH A:2302 , HOH A:2351 , HOH A:2371 , HOH A:2372 , TRP B:681 , PHE B:696 , HIS B:697 , GLN B:698 , GLU B:699BINDING SITE FOR RESIDUE H4B A 760
3AC3SOFTWAREPRO A:570 , VAL A:572 , ASN A:574 , TRP A:592 , TYR A:593 , GLU A:597 , TYR A:711 , HEM A:750BINDING SITE FOR RESIDUE XEB A 800
4AC4SOFTWAREALA A:679 , ASP A:680 , TRP A:681 , MET A:700 , ASN A:702 , HOH A:2027 , CYS B:336 , MET B:337 , GLY B:338 , SER B:339BINDING SITE FOR RESIDUE GOL A 880
5AC5SOFTWARECYS A:331 , CYS A:336 , CYS B:331 , CYS B:336BINDING SITE FOR RESIDUE ZN A 900
6AC6SOFTWARETRP B:414 , ARG B:419 , CYS B:420 , SER B:462 , PHE B:589 , SER B:590 , TRP B:592 , GLU B:597 , TRP B:683 , PHE B:709 , TYR B:711 , H4B B:760 , XEB B:800 , HOH B:2273 , HOH B:2274BINDING SITE FOR RESIDUE HEM B 750
7AC7SOFTWARETRP A:681 , PHE A:696 , HIS A:697 , GLN A:698 , GLU A:699 , HOH A:2356 , SER B:339 , ARG B:601 , VAL B:682 , TRP B:683 , HEM B:750 , HOH B:2018 , HOH B:2224 , HOH B:2262 , HOH B:2274BINDING SITE FOR RESIDUE H4B B 760
8AC8SOFTWAREPRO B:570 , VAL B:572 , ASN B:574 , PHE B:589 , TRP B:592 , TYR B:593 , GLU B:597 , HEM B:750 , HOH B:2274BINDING SITE FOR RESIDUE XEB B 800
9AC9SOFTWAREPHE B:360 , LYS B:364 , MET B:383 , LEU B:386 , GLU B:387 , ASN B:390 , ILE B:393 , ASP B:394BINDING SITE FOR RESIDUE XEB B 801

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5ADG)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Thr A:706 -Pro A:707
2Thr B:706 -Pro B:707

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5ADG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5ADG)

(-) Exons   (0, 0)

(no "Exon" information available for 5ADG)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:413
                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee......eeeehhhhhh.....................hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.....hhhhh...eeee.....hhhhhhhhhhhhhhhhhhhhh...eeee...........ee.........eee.....eee...hhhhhhhhhhh.............eeee......eee..hhhhh.eee.....hhhhhhhh.eee...ee...eeee..eee....ee..eehhhhhhhhhhh.....hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhh....hhhhhh...hhhhhhhhh..........eee...hhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5adg A 302 CPRFLKVKNWETEVVLTDTLHLKSTLETGCTEYICMGSIMHPDVATKDQLFPLAKEFIDQYYSSIKRFGSKAHMERLEEVNKEIDTTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQVFDARDCTTAHGMFNYICNHVKYATNKGNLRSAITIFPQRTDGKHDFRVWNSQLIRYAGYKQPDGSTLGDPANVQFTEICIQQGWKPPRGRFDVLPLLLQANGNDPELFQIPPELVLEVPIRHPKFEWFKDLGLKWYGLPAVSNMLLEIGGLEFSACPFSGWYMGTEIGVRDYCDNSRYNILEEVAKKMNLDMRKTSSLWKDQALVEINIAVLYSFQSDKVTIVDHHSATESFIKHMENEYRCRGGCPADWVWIVPPMSGSITPVFHQEMLNYRLTPSFEYQPDPWNTHVWK 722
                                   311       321       331       341 ||    359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709       719   
                                                                   343|                                                                                                                                                                                                                                                                                                                                                                                  
                                                                    352                                                                                                                                                                                                                                                                                                                                                                                  


Chain B from PDB  Type:PROTEIN  Length:409
                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeeehhhhhh...................hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.....hhhhh...eeee.....hhhhhhhhhhhhhhhhhhhhh...eeee...........ee.........eee.....eee...hhhhhhhhhhh.............eeee......eee..hhhhh.eee.....hhhhhhhh.eee...ee...eeee..eee....ee..eehhhhhhhhhhh.....hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh...eehhhhhhhhhhhhhhhhhhhhh....hhhhhh...hhhhhhhhh..........eee...hhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5adg B 304 RFLKVKNWETEVVLTDTLHLKSTLETGCTEYICMGSIMHPATKDQLFPLAKEFIDQYYSSIKRFGSKAHMERLEEVNKEIDTTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQVFDARDCTTAHGMFNYICNHVKYATNKGNLRSAITIFPQRTDGKHDFRVWNSQLIRYAGYKQPDGSTLGDPANVQFTEICIQQGWKPPRGRFDVLPLLLQANGNDPELFQIPPELVLEVPIRHPKFEWFKDLGLKWYGLPAVSNMLLEIGGLEFSACPFSGWYMGTEIGVRDYCDNSRYNILEEVAKKMNLDMRKTSSLWKDQALVEINIAVLYSFQSDKVTIVDHHSATESFIKHMENEYRCRGGCPADWVWIVPPMSGSITPVFHQEMLNYRLTPSFEYQPDPWNTHVWK 722
                                   313       323       333       343|      363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713         
                                                                 343|                                                                                                                                                                                                                                                                                                                                                                                
                                                                  354
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5ADG)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5ADG)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5ADG)

(-) Gene Ontology  (105, 105)

Asymmetric/Biological Unit(hide GO term definitions)

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  5adg
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  NOS1_HUMAN | P29475
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NOS1_HUMAN | P29475: 4d1n 4uch 4uh5 4uh6 4v3u 5adf 5adi 5fvu 5fvv 5fvw 5fvx 5uo1 5uo2 5uo3 5uo4 5uo5 5uo6 5uo7

(-) Related Entries Specified in the PDB File

5ad4 STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((3-(2-(DIMETHYLAMINO)ETHYL) PHENOXY)METHYL)QUINOLIN-2-AMINE
5ad5 STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((3-(2-(METHYLAMINO)ETHYL) PHENOXY)METHYL)QUINOLIN-2-AMINE
5ad6 STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((3-(DIMETHYLAMINO)METHYL) PHENOXY)METHYL)QUINOLIN-2-AMINE
5ad7 STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((3-(METHYLAMINO)METHYL) PHENOXY)METHYL)QUINOLIN-2-AMINE
5ad8 STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((3-AMINOMETHYL)PHENOXY) METHYL)QUINOLIN-2-AMINE
5ad9 STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((4-(DIMETHYLAMINO)METHYL) PHENOXY)METHYL)QUINOLIN-2-AMINE
5ada STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-(((3-((DIMETHYLAMINO)METHYL) PHENYL)AMINO)METHYL)QUINOLIN-2-AMINE
5adb STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((4-CHLORO-3-((METHYLAMINO) METHYL)PHENOXY)METHYL)QUINOLIN-2-AMINE
5adc STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-(((5-((METHYLAMINO)METHYL) PYRIDIN-3-YL)OXY)METHYL)QUINOLIN-2-AMINE
5add STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((3-(METHYLAMINO)METHYL) PHENOXY)METHYL)QUINOLIN-2-AMINE
5ade STRUCTURE OF RAT NEURONAL NITRIC OXIDE SYNTHASE M336V D597N MUTANT HEME DOMAIN IN COMPLEX WITH 7-((4- CHLORO-3-((METHYLAMINO)METHYL)PHENOXY)METHYL)QUINOLIN-2 -AMINE
5adf STRUCTURE OF HUMAN NNOS R354A G357D MUTANT HEME DOMAIN IN COMPLEX WITH 7-(((3-((DIMETHYLAMINO)METHYL)PHENYL) AMINO)METHYL)QUINOLIN-2-AMINE
5adi STRUCTURE OF HUMAN NNOS R354A G357D MUTANT HEME DOMAIN IN COMPLEX WITH 7-(((5-((METHYLAMINO)METHYL)PYRIDIN- 3-YL)OXY)METHYL)QUINOLIN-2-AMINE
5adj STRUCTURE OF BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((3-(2-(METHYLAMINO) ETHYL)PHENOXY)METHYL)QUINOLIN-2-AMINE
5adk STRUCTURE OF BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((3-(DIMETHYLAMINO) METHYL)PHENOXY)METHYL)QUINOLIN-2-AMINE
5adl STRUCTURE OF BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((3-(METHYLAMINO)METHYL )PHENOXY)METHYL)QUINOLIN-2-AMINE
5adm STRUCTURE OF BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-((3-AMINOMETHYL)PHENOXY )METHYL)QUINOLIN-2-AMINE
5adn STRUCTURE OF BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 7-(((3-((DIMETHYLAMINO) METHYL)PHENYL)AMINO)METHYL)QUINOLIN-2-AMINE