Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
(-)Biological Unit 3
(-)Biological Unit 4
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)
Image Biological Unit 4
Biological Unit 4  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF MLTF FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH NAG-ANHNAM-PENTAPEPTIDE
 
Authors :  T. Dominguez-Gil, I. Acebron, J. A. Hermoso
Date :  23 Jul 15  (Deposition) - 12 Oct 16  (Release) - 22 Mar 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.89
Chains :  Asym. Unit :  A,B,C,D,E
Biol. Unit 1:  A,E  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Lyase, Lytic Transglycosilase, Cell Wall Recycling (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  T. Dominguez-Gil, M. Lee, I. Acebron-Avalos, K. V. Mahasenan, D. Hesek, D. A. Dik, B. Byun, E. Lastochkin, J. F. Fisher, S. Mobashery, J. A. Hermoso
Activation By Allostery In Cell-Wall Remodeling By A Modula Membrane-Bound Lytic Transglycosylase From Pseudomonas Aeruginosa.
Structure V. 24 1729 2016
PubMed-ID: 27618662  |  Reference-DOI: 10.1016/J.STR.2016.07.019

(-) Compounds

Molecule 1 - MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F
    ChainsA, B, C, D
    EC Number4.2.2.-
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentUNP RESIDUES 8-490
    Organism ScientificPSEUDOMONAS AERUGINOSA
    Organism Taxid1402513
    StrainBWHPSA013
    SynonymMUREIN LYASE F
 
Molecule 2 - N-ACETYLGLUCOSAMINE-1,6-ANHYDRO-N-ACETYLMURAMIC ACID L-ALA- D-GLU-M-DAP-D-ALA-D-ALA
    ChainsE
    Organism ScientificPSEUDOMONAS AERUGINOSA
    Organism Taxid287

 Structural Features

(-) Chains, Units

  12345
Asymmetric Unit ABCDE
Biological Unit 1 (1x)A   E
Biological Unit 2 (1x) B   
Biological Unit 3 (1x)  C  
Biological Unit 4 (1x)   D 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 10)

Asymmetric Unit (5, 10)
No.NameCountTypeFull Name
1AH01Mod. Amino Acid2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID
2API1Mod. Amino Acid2,6-DIAMINOPIMELIC ACID
3CL5Ligand/IonCHLORIDE ION
4DAL2Mod. Amino AcidD-ALANINE
5FGA1Mod. Amino AcidGAMMA-D-GLUTAMIC ACID
Biological Unit 1 (4, 5)
No.NameCountTypeFull Name
1AH01Mod. Amino Acid2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID
2API1Mod. Amino Acid2,6-DIAMINOPIMELIC ACID
3CL-1Ligand/IonCHLORIDE ION
4DAL2Mod. Amino AcidD-ALANINE
5FGA1Mod. Amino AcidGAMMA-D-GLUTAMIC ACID
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1AH0-1Mod. Amino Acid2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID
2API-1Mod. Amino Acid2,6-DIAMINOPIMELIC ACID
3CL-1Ligand/IonCHLORIDE ION
4DAL-1Mod. Amino AcidD-ALANINE
5FGA-1Mod. Amino AcidGAMMA-D-GLUTAMIC ACID
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1AH0-1Mod. Amino Acid2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID
2API-1Mod. Amino Acid2,6-DIAMINOPIMELIC ACID
3CL-1Ligand/IonCHLORIDE ION
4DAL-1Mod. Amino AcidD-ALANINE
5FGA-1Mod. Amino AcidGAMMA-D-GLUTAMIC ACID
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1AH0-1Mod. Amino Acid2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID
2API-1Mod. Amino Acid2,6-DIAMINOPIMELIC ACID
3CL-1Ligand/IonCHLORIDE ION
4DAL-1Mod. Amino AcidD-ALANINE
5FGA-1Mod. Amino AcidGAMMA-D-GLUTAMIC ACID

(-) Sites  (9, 9)

Asymmetric Unit (9, 9)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:379BINDING SITE FOR RESIDUE CL A 1460
2AC2SOFTWAREARG B:136 , ASN B:137 , ASN B:216BINDING SITE FOR RESIDUE CL B 1459
3AC3SOFTWAREARG D:330BINDING SITE FOR RESIDUE CL D 1460
4AC4SOFTWARESER B:160BINDING SITE FOR RESIDUE CL B 1460
5AC5SOFTWARETYR A:94 , GLY A:158 , GLU A:163 , HOH A:2010 , HOH A:2011 , FGA E:3Binding site for Di-peptide AH0 E 1 and ALA E 2
6AC6SOFTWARELEU A:90 , TYR A:94 , GLY A:109 , LEU A:110 , THR A:111 , GLY A:158 , SER A:159 , SER A:160 , HIS A:161 , GLU A:163 , ASP A:203 , HOH A:2010 , AH0 E:1 , API E:4 , DAL E:5Binding site for Di-peptide ALA E 2 and FGA E 3
7AC7SOFTWAREARG A:50 , LEU A:90 , TYR A:94 , GLY A:109 , LEU A:110 , THR A:111 , VAL A:155 , LEU A:156 , GLY A:158 , SER A:159 , SER A:160 , HIS A:161 , VAL A:185 , LEU A:188 , LEU A:201 , VAL A:202 , ASP A:203 , GLU A:206 , HOH A:2021 , ALA E:2 , DAL E:5Binding site for residues FGA E 3 and API E 4
8AC8SOFTWAREARG A:50 , ALA A:108 , GLY A:109 , VAL A:155 , LEU A:156 , SER A:159 , HIS A:161 , VAL A:185 , LEU A:188 , LEU A:201 , VAL A:202 , ASP A:203 , ASN A:205 , GLU A:206 , HOH A:2021 , FGA E:3 , DAL E:6Binding site for Di-peptide API E 4 and DAL E 5
9AC9SOFTWAREARG A:50 , ALA A:54 , THR A:55 , PHE A:66 , GLU A:67 , ALA A:108 , GLY A:109 , ASP A:203 , ASN A:205 , GLU A:206 , LEU A:229 , TYR A:266 , FGA E:3 , API E:4Binding site for Di-peptide DAL E 5 and DAL E 6

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5AA1)

(-) Cis Peptide Bonds  (22, 22)

Asymmetric Unit
No.Residues
1Gly A:43 -Val A:44
2Gly A:235 -Gly A:236
3Glu A:375 -Pro A:376
4Gln A:458 -Pro A:459
5Gly B:109 -Leu B:110
6Ala B:118 -Ser B:119
7Ser B:123 -His B:124
8Gly B:138 -Gln B:139
9Ala B:208 -Met B:209
10Phe B:221 -Asp B:222
11Gly B:235 -Gly B:236
12Glu B:375 -Pro B:376
13Thr B:457 -Gln B:458
14Gly C:235 -Gly C:236
15Gly C:267 -His C:268
16Val C:271 -Leu C:272
17Leu C:272 -Gly C:273
18Glu C:375 -Pro C:376
19Pro D:112 -Gly D:113
20Ala D:118 -Ser D:119
21Gly D:235 -Gly D:236
22Glu D:375 -Pro D:376

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5AA1)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5AA1)

(-) Exons   (0, 0)

(no "Exon" information available for 5AA1)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:418
                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.......eee..eeehhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhh.....ee..............eeeeeeeee.eeeeee.......hhhhhh...eeee..hhhhhhhhhhhhhh.....eee...hhhhhhhhhhh....eeeeehhhhhhhhhhh..eeeeee....eeeeeee.....hhhhhhhhhhhh.....hhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.................hhhhhhh.......hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5aa1 A  42 EGVLRVITRNSPATYFQDRNGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTYLDVTPQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKYEESDAVEVVDLLRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKDRYYGHVDVLGYVGAYTFTQHLQQRLPRYESHFKQSGKQKDTDWRLLAAIGYQESLWQPGATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQP 459
                                    51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451        

Chain B from PDB  Type:PROTEIN  Length:413
                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......eee..eeehhhhhhhhhhhhh...eeeeee..hhhhhhhhhhh.....ee.............eee.....ee..eeeee.......hhhhhh...eeee..hhhhhhhhhhhhhh.....eee...hhhhhhhhhhhh...eeee.......hhhhh..eeeeee....ee...eee....hhhhhhhhhhhhhhhhh..hhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..........ee....eehhhhhhh......hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5aa1 B  43 GVLRVITRNSPATYFQDRNGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTYLDVTPQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKYEESDAVEVVDLLRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKDRYYGHLGYVGAYTFTQHLQQRLPRYESHFKQSGKQKDTDWRLLAAIGYQESLWQPGATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQ 458
                                    52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262     ||275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455   
                                                                                                                                                                                                                                                           268|                                                                                                                                                                                          
                                                                                                                                                                                                                                                            272                                                                                                                                                                                          

Chain C from PDB  Type:PROTEIN  Length:419
                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee.......eee..eeehhhhhhhhhhhhhhh.eeeeee..hhhhhhhhhh......eeeeee.........eee....eee.eeeeee.......hhhhhh....eee..hhhhhhhhhhhhhh.....eee...hhhhhhhhhhh.....eeeehhhhhhhhhhh..eeeeee....eeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhh...hhhhhhhhh.....hhhhhhhhhhhhhh.................hhhhhhh.......hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5aa1 C  41 KEGVLRVITRNSPATYFQDRNGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTYLDVTPQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKYEESDAVEVVDLLRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKDRYYGHVDVLGYVGAYTFTQHLQQRLPRYESHFKQSGKQKDTDWRLLAAIGYQESLWQPGATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQP 459
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450         

Chain D from PDB  Type:PROTEIN  Length:417
                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......eee..eeehhhhhhhhhhhhhh..eeeeee..hhhhhhhhhh......eeeeee.........eee....eee.eeeeee.......hhhhhh...eeee..hhhhhhhhhhhhhh.....eee...hhhhhhhhhhhh...eeeeehhhhhhhhhhh..eeeeee....eeeeeeee.....hhhhhhhhhh......hhhhhhhh...........hhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.................hhhhhhhh......hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5aa1 D  43 GVLRVITRNSPATYFQDRNGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSREGGPALAAAGLTPGREDDASVRYSHTYLDVTPQIIYRNGQQRPTRPEDLVGKRIMVLKGSSHAEQLAELKKQYPELKYEESDAVEVVDLLRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKDRYYGHVDVLGYVGAYTFTQHLQQRLPRYESHFKQSGKQKDTDWRLLAAIGYQESLWQPGATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQP 459
                                    52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       

Chain E from PDB  Type:PROTEIN  Length:6
                                      
               SCOP domains ------ SCOP domains
               CATH domains ------ CATH domains
               Pfam domains ------ Pfam domains
         Sec.struct. author ...... Sec.struct. author
                 SAPs(SNPs) ------ SAPs(SNPs)
                    PROSITE ------ PROSITE
                 Transcript ------ Transcript
                 5aa1 E   1 xAxkxx   6
                            | ||||
                            1-AH0|
                              3-FGA
                               4-API
                                5-DAL
                                 6-DAL

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5AA1)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5AA1)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5AA1)

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    AH0  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    API  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    DAL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    FGA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Ala B:118 - Ser B:119   [ RasMol ]  
    Ala B:208 - Met B:209   [ RasMol ]  
    Ala D:118 - Ser D:119   [ RasMol ]  
    Gln A:458 - Pro A:459   [ RasMol ]  
    Glu A:375 - Pro A:376   [ RasMol ]  
    Glu B:375 - Pro B:376   [ RasMol ]  
    Glu C:375 - Pro C:376   [ RasMol ]  
    Glu D:375 - Pro D:376   [ RasMol ]  
    Gly A:235 - Gly A:236   [ RasMol ]  
    Gly A:43 - Val A:44   [ RasMol ]  
    Gly B:109 - Leu B:110   [ RasMol ]  
    Gly B:138 - Gln B:139   [ RasMol ]  
    Gly B:235 - Gly B:236   [ RasMol ]  
    Gly C:235 - Gly C:236   [ RasMol ]  
    Gly C:267 - His C:268   [ RasMol ]  
    Gly D:235 - Gly D:236   [ RasMol ]  
    Leu C:272 - Gly C:273   [ RasMol ]  
    Phe B:221 - Asp B:222   [ RasMol ]  
    Pro D:112 - Gly D:113   [ RasMol ]  
    Ser B:123 - His B:124   [ RasMol ]  
    Thr B:457 - Gln B:458   [ RasMol ]  
    Val C:271 - Leu C:272   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]
    Biological Unit 4  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  5aa1
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  MLTF_PSEAE | Q9HXN1
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  4.2.2.-
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  MLTF_PSEAE | Q9HXN1
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MLTF_PSEAE | Q9HXN14owd 4oyv 4oz9 4p0g 4p11 5a5x 5aa2 5aa3

(-) Related Entries Specified in the PDB File

5aa2 CRYSTAL STRUCTURE OF MLTF FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH NAM-PENTAPEPTIDE.
5aa3 CRYSTAL STRUCTURE OF MLTF FROM PSEUDOMONAS AERUGINOSA IN THE PRESENCE OF TETRASACCHARIDE AND TETRAPEPTIDE
5aa4 CRYSTAL STRUCTURE OF MLTF FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH CELL-WALL TETRAPEPTIDE