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(-) Description

Title :  THE STRUCTURE OF A DOMAIN OF A FUNCTIONALLY UNKNOWN PROTEIN FROM BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168
 
Authors :  K. Tan, H. Li, R. Jedrzejczak, A. Joachimiak, Midwest Center For Str Genomics (Mcsg)
Date :  11 May 15  (Deposition) - 27 May 15  (Release) - 27 May 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.86
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Structural Genomics, Psi-Biology, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  K. Tan, H. Li, R. Jedrzejczak, A. Joachimiak
The Structure Of A Domain Of A Functionally Unknown Protein From Bacillus Subtilis Subsp. Subtilis Str. 168
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SENSOR HISTIDINE KINASE RESE
    ChainsA, B, C, D
    EC Number2.7.13.3
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPMCSG68
    Expression System StrainBL21(DE)MAGIC
    Expression System Taxid511693
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUES 40-162
    GeneRESE, YPXE, BSU23110
    Organism ScientificBACILLUS SUBTILIS
    Organism Taxid224308
    Strain168

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)A   
Biological Unit 2 (1x) B  
Biological Unit 3 (1x)  C 
Biological Unit 4 (1x)   D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 14)

Asymmetric Unit (3, 14)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2CL9Ligand/IonCHLORIDE ION
3MSE4Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2CL-1Ligand/IonCHLORIDE ION
3MSE1Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2CL-1Ligand/IonCHLORIDE ION
3MSE1Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2CL-1Ligand/IonCHLORIDE ION
3MSE1Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (2, 2)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2CL-1Ligand/IonCHLORIDE ION
3MSE1Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:85 , GLU A:86 , HIS A:89binding site for residue CL A 201
02AC2SOFTWAREASP A:133 , ARG B:67binding site for residue CL A 202
03AC3SOFTWAREPRO A:93 , HOH A:339 , TRP D:71binding site for residue CL A 203
04AC4SOFTWAREGLN B:63 , ARG B:67 , TRP B:90binding site for residue CL B 201
05AC5SOFTWARETHR B:103 , VAL B:104 , GLU B:105 , HOH B:347 , ASP C:62binding site for residue CL B 202
06AC6SOFTWAREASP A:131 , ALA B:64 , ARG B:67binding site for residue CL B 203
07AC7SOFTWAREARG C:67 , HOH C:313binding site for residue CL C 201
08AC8SOFTWAREGLU A:41 , ALA A:42 , SER D:37 , ALA D:39binding site for residue ACT D 201
09AC9SOFTWAREHIS A:89 , HOH A:332 , GLN D:63 , ALA D:64 , HOH D:305 , HOH D:315binding site for residue CL D 202
10AD1SOFTWARELYS D:125 , HOH D:313binding site for residue CL D 203

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ZR7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4ZR7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ZR7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4ZR7)

(-) Exons   (0, 0)

(no "Exon" information available for 4ZR7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:118
                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.....eeeeeeee..eeee.......hhhhhhhhhhhhhhhhhh..eeeee..........eeeeeeeeee..eeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 4zr7 A  41 EAENDLTQLANKVAVILENHEDQALARSITWELADNLTSIAIIQDEKNHWYSPNLSSITVEQIQHDKDLNKALKDHKKVSKRTGLSDTDTDNERLIVGVPYEKDGKKGmVFLSQSLLA 162
                                    50        60        70        80        90   ||  104       114       124       134       144       154        
                                                                                94|                                                   153-MSE     
                                                                                 99                                                               

Chain B from PDB  Type:PROTEIN  Length:116
                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh..hhhhhhhhhhh.....eeeeee.....eee.....hhhhhhhhhhhhhhhhhh..eeeee..........eeeeeeeeee..eeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
                 4zr7 B  41 EAENDLTQLANKVAVILENHEDQALARSITWELADNLTSIAIIQDEKNHWYSPNSITVEQIQHDKDLNKALKDHKKVSKRTGLSDTDTDNERLIVGVPYEKDGKKGmVFLSQSLLA 162
                                    50        60        70        80        90   ||  106       116       126       136       146      |156      
                                                                                94|                                                 153-MSE     
                                                                                101                                                             

Chain C from PDB  Type:PROTEIN  Length:116
                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh...eeeeee.....eee......hhhhhhhhhhhhhhhhh...eeeee..........eeeeeeeeee..eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
                 4zr7 C  41 EAENDLTQLANKVAVILENHEDQALARSITWELADNLTSIAIIQDEKNHWYSPNSSITVEQIQHDKDLNKALKDHKKVSKRTGLSDTDTDNERLIVGVPYEKDGKKGmVFLSQSLL 161
                                    50        60        70        80        90   ||  105       115       125       135       145       155      
                                                                                94|                                                  153-MSE    
                                                                                100                                                             

Chain D from PDB  Type:PROTEIN  Length:120
                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh...eeeeee.....eee......hhhhhhhhhhhhhhhhhh..eeeee..........eeeeeeeee....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
                 4zr7 D  37 SNAEEAENDLTQLANKVAVILENHEDQALARSITWELADNLTSIAIIQDEKNHWYSPNSSITVEQIQHDKDLNKALKDHKKVSKRTGLSDTDTDNERLIVGVPYEKDGKKGmVFLSQSLL 161
                                    46        56        66        76        86       101       111       121       131       141       151 |     161
                                                                                    94|                                                  153-MSE    
                                                                                    100                                                             

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ZR7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ZR7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4ZR7)

(-) Gene Ontology  (18, 18)

Asymmetric Unit(hide GO term definitions)

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