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(-) Description

Title :  CRYSTAL STRUCTURE OF LC3 IN COMPLEX WITH FAM134B LIR
 
Authors :  A. Khaminets, P. Grumati, I. Dikic, M. Akutsu
Date :  19 Apr 15  (Deposition) - 03 Jun 15  (Release) - 24 Jun 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A
Keywords :  Autophagy, Er-Phagy, Complex, Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Khaminets, T. Heinrich, M. Mari, P. Grumati, A. K. Huebner, M. Akutsu, L. Liebmann, A. Stolz, S. Nietzsche, N. Koch, M. Mauthe, I. Katona, B. Qualmann, J. Weis, F. Reggiori, I. Kurth, C. A. Hubner, I. Dikic
Regulation Of Endoplasmic Reticulum Turnover By Selective Autophagy.
Nature V. 522 354 2015
PubMed-ID: 26040720  |  Reference-DOI: 10.1038/NATURE14498

(-) Compounds

Molecule 1 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3A
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: MAP1LC3A
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: AUTOPHAGY-RELATED PROTEIN LC3 A,AUTOPHAGY-RELATED UBIQUITIN- LIKE MODIFIER LC3 A,MAP1 LIGHT CHAIN 3-LIKE PROTEIN 1,MAP1A/MAP1B LIGHT CHAIN 3 A,MAP1A/MAP1B LC3 A,MICROTUBULE-ASSOCIATED PROTEIN 1 LIGHT CHAIN 3 ALPHA

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4ZDV)

(-) Sites  (0, 0)

(no "Site" information available for 4ZDV)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ZDV)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ZDV)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:126
                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeeeee.............eeeee...hhhhhhhhhhhhh........eeee..ee......hhhhhhhhhh.....eeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4zdv A  -6 DDFELLDGPSDRPFKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETF 119
                                     3        13        23        33        43        53        63        73        83        93       103       113
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ZDV)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (21, 21)

Asymmetric/Biological Unit(hide GO term definitions)

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  4zdv
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MLP3A_HUMAN | Q9H492: 3eci 3wal 3wan 5cx3 5dpr

(-) Related Entries Specified in the PDB File

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