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(-) Description

Title :  TEAD DBD MUTANT -DELTAL1
 
Authors :  D. -S. Lee, D. C. Albarado, C. Vonrhein, C. S. Raman, S. Veeraraghavan
Date :  08 Apr 15  (Deposition) - 13 Apr 16  (Release) - 15 Jun 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.09
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  A,B,C  (2x)
Keywords :  Transcription Factor, Dna Binding, Three Helix Bundle, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  D. S. Lee, C. Vonrhein, D. Albarado, C. S. Raman, S. Veeraraghavan
A Potential Structural Switch For Regulating Dna-Binding By Tead Transcription Factors.
J. Mol. Biol. V. 428 2557 2016
PubMed-ID: 27016204  |  Reference-DOI: 10.1016/J.JMB.2016.03.008

(-) Compounds

Molecule 1 - TRANSCRIPTIONAL ENHANCER FACTOR TEF-1
    ChainsA, B, C
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21(DE3)
    Expression System PlasmidPET21D
    Expression System StrainROSETTA2(DE3) PLYSS
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUES 28-104
    GeneTEAD1, TCF13, TEF1
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymNTEF-1, PROTEIN GT-IIC, TEA DOMAIN FAMILY MEMBER 1, TEAD-1, TRANSCRIPTION FACTOR 13, TCF-13

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit ABC
Biological Unit 1 (1x)A  
Biological Unit 2 (1x) B 
Biological Unit 3 (1x)  C
Biological Unit 4 (2x)ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4Z8E)

(-) Sites  (0, 0)

(no "Site" information available for 4Z8E)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4Z8E)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4Z8E)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Z8E)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Z8E)

(-) Exons   (0, 0)

(no "Exon" information available for 4Z8E)

(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:59
                                                                                          
               SCOP domains ----------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------- Transcript
                  4z8e A 16 NDAEGVWSPDIEQSFQEALSIYPGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLAR 74
                                    25        35        45        55        65         

Chain B from PDB  Type:PROTEIN  Length:58
                                                                                         
               SCOP domains ---------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------- Transcript
                  4z8e B 17 DAEGVWSPDIEQSFQEALSIYPGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLAR 74
                                    26        36        46        56        66        

Chain C from PDB  Type:PROTEIN  Length:55
                                                                                      
               SCOP domains ------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------- Transcript
                  4z8e C 20 GVWSPDIEQSFQEALSIYPGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLAR 74
                                    29        39        49        59        69     

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Z8E)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4Z8E)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Z8E)

(-) Gene Ontology  (12, 12)

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  TEAD1_HUMAN | P28347
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TEAD1_HUMAN | P283472hzd 3kys 4re1 5nnx

(-) Related Entries Specified in the PDB File

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