4Z3G - JenaLib

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Title :   CRYSTAL STRUCTURE OF THE LECTIN DOMAIN OF PAPG FROM E. COLI BI47 IN COMPLEX WITH 4-METHOXYPHENYL BETA-D-GALABIOSE IN SPACE GROUP P212121

Authors :   R. P. Jakob, G. Navarra, P. Zihlmann, K. Stangier, R. C. Preston, S. Rabb T. Maier, B. Ernst

Date :   31 Mar 15 (Deposition) - 13 Apr 16 (Release) - 13 Apr 16 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.45

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Upec, Urinary Tract Infection, Fimbrial Adhesin, Adhesin, Type I Pili, Papg, Carbohydrate Binding, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   G. Navarra, P. Zihlmann, R. P. Jakob, K. Stangier, R. C. Preston, S. Rabbani, T. Maier, B. Ernst
An Unexpected Way Nature Improves Solvation Entropy
To Be Published
PubMed: search

Molecule 1 - PAPG, LECTIN DOMAIN
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PET-22B
	Expression System Taxid	:	469008
	Expression System Variant	:	ADA494
	Fragment	:	RESIDUES 20-216
	Gene	:	G801_04654, G801_04690
	Organism Scientific	:	ESCHERICHIA COLI
	Organism Taxid	:	562
	Strain	:	4-5674999

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 8)

No.	Name	Count	Type	Full Name
1	4KS	2	Ligand/Ion	4-METHOXYPHENOL
2	GAL	2	Ligand/Ion	BETA-D-GALACTOSE
3	GLA	2	Ligand/Ion	ALPHA D-GALACTOSE
4	MES	2	Ligand/Ion	2-(N-MORPHOLINO)-ETHANESULFONIC ACID

Biological Unit 1 (4, 4)

No.	Name	Count	Type	Full Name
1	4KS	1	Ligand/Ion	4-METHOXYPHENOL
2	GAL	1	Ligand/Ion	BETA-D-GALACTOSE
3	GLA	1	Ligand/Ion	ALPHA D-GALACTOSE
4	MES	1	Ligand/Ion	2-(N-MORPHOLINO)-ETHANESULFONIC ACID

Biological Unit 2 (4, 4)

No.	Name	Count	Type	Full Name
1	4KS	1	Ligand/Ion	4-METHOXYPHENOL
2	GAL	1	Ligand/Ion	BETA-D-GALACTOSE
3	GLA	1	Ligand/Ion	ALPHA D-GALACTOSE
4	MES	1	Ligand/Ion	2-(N-MORPHOLINO)-ETHANESULFONIC ACID

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	LYS A:73 , ASN A:74 , LEU A:146 , GLY A:147 , ASP A:148 , TYR A:149 , SER A:150 , HOH A:317 , HOH A:462 , HOH A:485 , HOH A:526	binding site for residue MES A 201
2	AC2	SOFTWARE	LYS B:73 , ASN B:74 , LEU B:146 , GLY B:147 , ASP B:148 , TYR B:149 , SER B:150	binding site for residue MES B 201
3	AC3	SOFTWARE	GLU A:59 , GLU A:91 , LYS A:103 , GLY A:104 , TRP A:107 , ARG A:170 , LYS A:172 , HOH A:305 , HOH A:325 , HOH A:333 , HOH A:342 , HOH A:425 , HOH A:493 , GLN B:16 , ASP B:148	binding site for Poly-Saccharide residues 4KS A 202 through GLA A 204
4	AC4	SOFTWARE	GLN A:16 , GLY A:18 , ASN A:19 , GLU A:59 , GLU A:91 , LYS A:103 , GLY A:104 , TRP A:107 , ARG A:170 , LYS A:172 , LEU A:190 , LYS A:192 , HOH A:305 , HOH A:325 , HOH A:333 , HOH A:335 , HOH A:342 , HOH A:408 , HOH A:425 , HOH A:493 , GLN B:16 , GLU B:59 , GLU B:91 , LYS B:103 , GLY B:104 , TRP B:107 , ASP B:148 , ARG B:170 , LYS B:172 , HOH B:333 , HOH B:346 , HOH B:350 , HOH B:382 , HOH B:387 , HOH B:442 , HOH B:452	binding site for Poly-Saccharide residues 4KS B 202 through GLA B 204

Asymmetric Unit

No.	Residues
1	A:44	-	A:118
2	B:44	-	B:118

(no "Cis Peptide Bond" information available for 4Z3G)

(no "SAP(SNP)/Variant" information available for 4Z3G)

(no "PROSITE Motif" information available for 4Z3G)

(no "Exon" information available for 4Z3G)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:198
                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeee..eeeeeeeeee.....eeee....eeeeeeeeee....ee.....eeeeeeeeeeee.eee.....eeeeeeee....eee......eeeeeeeeeeeeee...ee.......eeee......eeeeee.......eeeeeeeeeeeeeeeeee.........hhhhhh.....eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4z3g A  -1 MAWNNIVFYSLGDVNSYQGGNVVITQRPQFITSWRPGIATVTWNQCNGPEFADGSWAYYREYIAWVVFPKKVMTKNGYPLFIEVHNKGSWSEENTGDNDSYFFLKGYKWDQRAFDTANLCQKPGETTRLTEKFDDIIFKVALPADLPLGDYSVTIPYTSGIQRHFASYLGARFKIPYNVAKTLPRENEMLFLFKNIGG 196
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188

Chain B from PDB  Type:PROTEIN  Length:198
                                                                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeee..eeeeeeeeee.....eeee....eeeeeeeeee....ee.....eeeeeeeeeeee.eee.....eeeeeeee....eee......eeeeeeeeeeeeee...ee.......eeee......eeeeee.......eeeeeeeeeeeeeeeeee.........hhhhhh.....eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4z3g B  -1 MAWNNIVFYSLGDVNSYQGGNVVITQRPQFITSWRPGIATVTWNQCNGPEFADGSWAYYREYIAWVVFPKKVMTKNGYPLFIEVHNKGSWSEENTGDNDSYFFLKGYKWDQRAFDTANLCQKPGETTRLTEKFDDIIFKVALPADLPLGDYSVTIPYTSGIQRHFASYLGARFKIPYNVAKTLPRENEMLFLFKNIGG 196
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4Z3G)

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Ligands, Modified Residues, Ions (4, 8)

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