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(-) Description

Title :  PEPTAIBOL GICHIGAMIN ISOLATED FROM TOLYPOCLADIUM SUP_5
 
Authors :  L. Du, A. L. Risinger, C. A. Mitchell, B. W. Stamps, N. Pan, J. B. King, J. L L. M. Thomas, Z. Yang, B. S. Stevenson, S. L. Mooberry, R. H. Cichewicz
Date :  26 Mar 15  (Deposition) - 30 Mar 16  (Release) - 30 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.10
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Peptaibol, Anti-Cancer, Taibol, Antibiotic (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Du, A. L. Risinger, C. A. Mitchell, B. W. Stamps, N. Pan, J. B. King, J. L. Motley, L. M. Thomas, Z. Yang, B. S. Stevenson, S. L. Mooberry, R. H. Cichewicz
Peptaibol Gichigamin Isolated From Tolypocladium Sup_5
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PEPTAIBOL GICHIGAMIN
    Chains: A, B
    Organism Scientific: TOLYPOCLADIUM SP. SUP5 PDA-1
    Organism Taxid: 1501327

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 26)

Asymmetric Unit (4, 26)
No.NameCountTypeFull Name
1ACE2Mod. Amino AcidACETYL GROUP
2AIB12Mod. Amino AcidALPHA-AMINOISOBUTYRIC ACID
3BAL8Mod. Amino AcidBETA-ALANINE
4DIV4Mod. Amino AcidD-ISOVALINE
Biological Unit 1 (4, 13)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2AIB6Mod. Amino AcidALPHA-AMINOISOBUTYRIC ACID
3BAL4Mod. Amino AcidBETA-ALANINE
4DIV2Mod. Amino AcidD-ISOVALINE
Biological Unit 2 (4, 13)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2AIB6Mod. Amino AcidALPHA-AMINOISOBUTYRIC ACID
3BAL4Mod. Amino AcidBETA-ALANINE
4DIV2Mod. Amino AcidD-ISOVALINE

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 Sequence-Structure Mapping

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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:22
                                                     
               SCOP domains ---------------------- SCOP domains
               CATH domains ---------------------- CATH domains
               Pfam domains ---------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------- SAPs(SNPs)
                    PROSITE ---------------------- PROSITE
                 Transcript ---------------------- Transcript
                  4z0w A  1 xxPxPFxPAxxAxxLxxLxxLx 22
                            || |  | 10| || || 20 |
                            || |  |  || || 17-BAL|
                            1-ACE |  || || | 19-AIB
                             2-AIB|  || || |  20-AIB
                               4-AIB || || |    22-BAL
                                  7-DIV || |      
                                    10-AIB |      
                                     11-BAL|      
                                       13-DIV     
                                        14-BAL    


Chain B from PDB  Type:PROTEIN  Length:23
                                                      
               SCOP domains ----------------------- SCOP domains
               CATH domains ----------------------- CATH domains
               Pfam domains ----------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------- SAPs(SNPs)
                    PROSITE ----------------------- PROSITE
                 Transcript ----------------------- Transcript
                  4z0w B  1 xxPxPFxPAxxAxxLxxLxxLxG 23
                            || |  | 10| || || 20 | 
                            || |  |  || || 17-BAL| 
                            1-ACE |  || || | 19-AIB
                             2-AIB|  || || |  20-AIB
                               4-AIB || || |    22-BAL
                                  7-DIV || |       
                                    10-AIB |       
                                     11-BAL|       
                                       13-DIV      
                                        14-BAL
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 Classification and Annotation

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

1amt CRYSTAL STRUCTURE OF THE PEPTAIBOL ALAMETHICIN
1ee7 SOLUTION STRUCTURE OF THE PEPTAIBOL CHRYSOSPERMIN C BOUND TO DPC MICELLES
1gq0 SOLUTION STRUCTURE OF THE PEPTAIBOL ANTIAMOEBIN I
1ih9 SOLUTION STRUCTURE OF THE PEPTAIBOL ZERVAMICIN IIB BOUND TO DPC MICELLES
1joh CRYSTAL STRUCTURE OF THE PEPTAIBOL ANTIAMOEBIN I
1m24 CRYSTAL STRUCTURE OF THE PEPTAIBOL TRICHOTOXIN_A50E
1ob4 CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL A
1ob6 CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL B
1ob7 CRYSTAL STRUCTURE OF THE PEPTAIBOL CEPHAIBOL C
1r9u SOLUTION STRUCTURE OF THE PEPTAIBOL ZERVAMICIN IIB IN METHANOL