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(-) Description

Title :  SPAO(SPOA1,2)
 
Authors :  R. Q. Notti, C. E. Stebbins
Date :  22 Mar 15  (Deposition) - 03 Jun 15  (Release) - 03 Jun 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Type Iii Secretion System, Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Q. Notti, S. Bhattacharya, M. Lilic, C. E. Stebbins
A Common Assembly Module In Injectisome And Flagellar Type Iii Secretion Sorting Platforms.
Nat Commun V. 6 7125 2015
PubMed-ID: 25994170  |  Reference-DOI: 10.1038/NCOMMS8125

(-) Compounds

Molecule 1 - SURFACE PRESENTATION OF ANTIGENS PROTEIN SPAO
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 145-213
    Gene: SPAO, STM2891
    Organism Scientific: SALMONELLA TYPHIMURIUM (STRAIN LT2 / SGSC1412 / ATCC 700720)
    Organism Taxid: 99287
    Strain: LT2 / SGSC1412 / ATCC 700720
 
Molecule 2 - SURFACE PRESENTATION OF ANTIGENS PROTEIN SPAO
    Chains: B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 232-297
    Gene: SPAO, STM2891
    Organism Scientific: SALMONELLA TYPHIMURIUM
    Organism Taxid: 99287
    Strain: LT2 / SGSC1412 / ATCC 700720

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:41binding site for residue CL A 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4YX5)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Leu A:26 -Gly A:27

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4YX5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4YX5)

(-) Exons   (0, 0)

(no "Exon" information available for 4YX5)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:65
                                                                                                
               SCOP domains ----------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeeeee............eeee.eeeeeeee..eeeeeeee...eeee...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------- Transcript
                  4yx5 A  5 PKMLRWPLRFVIGSSDTQRSLLGRIGIGDVLLIRTSRAEVYCYAKKLGHFNRVEGGIIVETLDIQ 69
                                    14        24        34        44        54        64     


Chain B from PDB  Type:PROTEIN  Length:68
                                                                                                   
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeeeeehhhhhhhhhh..ee...hhhhheeee....eeeeeeeeee..eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                  4yx5 B  2 PVDVKLEFVLYRKNVTLAELEAMGQQQLLSLPTNAELNVEIMANGVLLGNGELVQMNDTLGVEIHEWL 69
                                    11        21        31        41        51        61
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4YX5)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4YX5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4YX5)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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  4yx5
    Family and Domain Information: ProDom | SYSTERS
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  SPAO_SALTY | P40699
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SPAO_SALTY | P40699: 4yx1 4yx7 4yxa

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4YX5)