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Title :  CRYSTAL STRUCTURE OF NATIVE GAF DOMAIN OF POTASSIUM SENSOR HISTIDINE KINASE KDPD FROM ESCHERICHIA COLI
 
Authors :  S. Kumar, D. A. Yernool
Date :  09 Feb 15  (Deposition) - 25 May 16  (Release) - 25 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Gaf-Domain, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Kumar, D. A. Yernool
Crystal Structure Of Native Gaf Domain Of Potassium Sensor Histidine Kinase Kdpd From Escherichia Coli
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SENSOR PROTEIN KDPD
    Chains: A
    EC Number: 2.7.13.3
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: GAF DOMAIN (UNP RESIDUES 515-646)
    Gene: KDPD, B0695, JW0683
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 83333
    Strain: K12

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4Y2F)

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(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Gln A:559 -Pro A:560

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:143
                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhheeeeeeee.....ee...........hhhhhhhhhhhh..ee...........eeeeeee..eeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4y2f A  -3 GAMDLYEMSKALAVGRSPQDIAATSEQFIASTFHARSQVLLPDDNGKLQPLTHPQGMTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMIPEQQRLLETFTLLVANALERLTKLAAALE 653
                               ||  520       530       540       550       560       570       580       590       600       610       620       630       640       650   
                               0|                                                                                                                                          
                              515
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Y2F)

(-) Gene Ontology  (22, 22)

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    Gln A:559 - Pro A:560   [ RasMol ]  
 
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  4y2f
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  KDPD_ECOLI | P21865
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        KDPD_ECOLI | P21865: 2ksf 4qpr

(-) Related Entries Specified in the PDB File

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