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(-) Description

Title :  THE CRYSTAL STRUCTURE OF KUPE VIRUS NUCLEOPROTEIN
 
Authors :  Y. Guo, W. Wang, X. Liu, X. Wang, J. Wang, T. Huo, B. Liu
Date :  04 Feb 15  (Deposition) - 02 Sep 15  (Release) - 18 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Nucleoprotein, Kupe Virus, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. Wang, X. Liu, X. Wang, H. Dong, C. Ma, J. Wang, B. Liu, Y. Mao, Y. Wang, T. Li, C. Yang, Y. Guo
Structural And Functional Diversity Of Nairovirus-Encoded Nucleoproteins.
J. Virol. V. 89 11740 2015
PubMed-ID: 26246561  |  Reference-DOI: 10.1128/JVI.01680-15

(-) Compounds

Molecule 1 - NUCLEOPROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: KUPE VIRUS
    Organism Taxid: 498356
    Synonym: NUCLEOCAPSID PROTEIN

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4XZC)

(-) Sites  (0, 0)

(no "Site" information available for 4XZC)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XZC)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4XZC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XZC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XZC)

(-) Exons   (0, 0)

(no "Exon" information available for 4XZC)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:468
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhh.................hhhhhhhhhh..hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....hhhhh........eee.hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh.hhhhhhh.........hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhhhhhh....hhhhhhhhhhhh..hhhhhhhh.........hhhhh........hhhhhhhhhh.....hhhhhhhh..hhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh...................eee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4xzc A   1 MENQIKANTKKEYDEWFKPYAEKTHLKSVLTNSASFCDALPDLSIFEVKMGLATDDREKDSIYACAMVEATKFCAPIYECGWACCTGMVENGLKWFDKNKDVIKLWDGKYSDLMKNVPEPEQLVAYQRAAQKWRQDNKFEINQYTRSLTHSVQADYKVPGEYAVEVKEMLSDMVRRRNILLNHVNWGRELAAGKFQVVFNPPWGDINKTGRSGIPLAVTSMVKVAELDGHKRLEDIRKTLLDLKKWIEDNKDELEDGKGDELVKTLTKQLADAIELAKKSSALRAQGAQIDSIFSSYYWAWKAGITPVTFPTLSQFLFEMGQGPRGGKKMIKALTNTPLKWGKKIISLFAEDDFNGNKLYMHPGVLTAGRMSEMGACFGVVPVSNPEDAVLGSGHSKSLLNYKIDTNAGNPCAKEIVQLFRIQKAGFDLDSMDIVASEHLLHQSLVGKRCHFQNAYKVKGNATNVEIV 483
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                                                                                                                                                                                                               182|                                                                                                                                                                                                                                                                                             
                                                                                                                                                                                                                198                                                                                                                                                                                                                                                                                             


Chain B from PDB  Type:PROTEIN  Length:465
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhh...................hhhhhhhhhhh.hhhhhhhhhhhhhhhhhh...hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....hhhhh............hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..hhhhhhhhh..hhhhhhhhhhhhhh....hhhhhhhhhhhhh.....hhhhhhhhhhh..hhhhhhhhh.....................hhhhhhhhhh.....hhhhhhhh..hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhh................... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xzc B   1 MENQIKANTKKEYDEWFKPYAEKTHLKSVLTNSASFCDALPDLSIFEVKMGLATDDREKDSIYACAMVEATKFCAPIYECGWACCTGMVENGLKWFDKNKDVIKLWDGKYSDLMKNVPEPEQLVAYQRAAQKWRQDNKFEINQYTRSLTHSVQADYKVPGEYAVEVKEMLSDMVRRRNISREHVNWGRELAAGKFQVVFNPPWGDINKTGRSGIPLAVTSMVKVAELDGHKRLEDIRKTLLDLKKWIEDNKDELEDGKGDELVKTLTKQLADAIELAKKSSALRAQGAQIDSIFSSYYWAWKAGITPVTFPTLSQFLFEMGQGPRGGKKMIKALTNTPLKWGKKIISLFAEDDFNGNKLYMHPGVLTAGRMSEMGACFGVVPVSNPEDAVLGSGHSKSLLNYKIDTNAGNPCAKEIVQLFRIQKAGFDLDMDIVASEHLLHQSLVGKRCHFQNAYKVKGNATNVE 481
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445|      456       466       476     
                                                                                                                                                                                                            179|                                                                                                                                                                                                                                                       445|                                  
                                                                                                                                                                                                             195                                                                                                                                                                                                                                                        447
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XZC)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XZC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XZC)

(-) Gene Ontology  (4, 4)

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 Related Entries

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(-) Related Entries Specified in the PDB File

4xz8 4xzc 4xze