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(-) Description

Title :  THE CRYSTAL STRUCTURE OF ERVE VIRUS NUCLEOPROTEIN
 
Authors :  Y. Guo, W. Wang, X. Liu, X. Wang, J. Wang, T. Huo, B. Liu
Date :  04 Feb 15  (Deposition) - 02 Sep 15  (Release) - 18 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.35
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Nucleoprotein, Erve Virus, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. Wang, X. Liu, X. Wang, H. Dong, C. Ma, J. Wang, B. Liu, Y. Mao, Y. Wang, T. Li, C. Yang, Y. Guo
Structural And Functional Diversity Of Nairovirus-Encoded Nucleoproteins.
J. Virol. V. 89 11740 2015
PubMed-ID: 26246561  |  Reference-DOI: 10.1128/JVI.01680-15

(-) Compounds

Molecule 1 - NUCLEOPROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 1-482
    Organism Scientific: ERVE VIRUS
    Organism Taxid: 248062

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4XZ8)

(-) Sites  (0, 0)

(no "Site" information available for 4XZ8)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XZ8)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Gly A:183 -Gly A:184

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XZ8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XZ8)

(-) Exons   (0, 0)

(no "Exon" information available for 4XZ8)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:473
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhh.....................hhhhhhhhhh..hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh...hhhhh........eeeee..hhhhhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhh.....hhhhhhhhhhhhh....hhhhhhhhhhh....hhhhhhh.........hhhhh........hhhhhhhhhh.....hhhhhhhh..hhhhhhhh.....hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.............hhhhheeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xz8 A   1 MENLIDFSGRDGLDRWLRATFPDVILSVGLTNYGSLMTSVPDLSHFEQMARQAKSEQEKDAVYSKALTEATRKAAPIAACALTSSKEMVKKGLQWFEDQIISEDGNFLVWHQNYEQLKKAPPSFEQLMGYQMSALNWRQSVGYGQLEETAVLVSQVIAQFSVPGTLVVTVQEMIKDMIARRGGGPKRGVSEEHVRCCVDIMNGNLSALINPAWGDIDKKNKNGLMLLTTGIAKLRELYGPAAMVKVQQAADKFGEWGKAQDVLDQSRVQEIHQVLLKSIAESTSFKNQIAQIDSVFSSYYWMWRAGITPESFPLLSDFLFELGQNARGSAKIIKTLDRIGLKWSKPLVNLFADSTFKMGRIHMHPAILTTGRLNEMGLCFGIIPASHPESAVNGSGFAKNILNVRTDGMNPSAQLIVQLFDIQRQSRTLSDLDVVSSEHLFHQILVGKRTAYQNAFQVKGNATDTKIVGFDPP 480
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280   ||  297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477   
                                                                                                                                                                                                                                                                                                                     284|                                                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                      292                                                                                                                                                                                            


Chain B from PDB  Type:PROTEIN  Length:473
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhh.......................hhhhhhhh..hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....hhhhh........eeeee..hhhhhhhhhhhhhhhh...........hhhhhhhhhh.hhhhhhh..............hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhh.....hhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhh.......hhhhh........hhhhhhhhhh.....hhhhhhhh..hhhhhhhh.....hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.............hhhhheeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xz8 B   1 MENLIDFSGRDGLDRWLRATFPDVILSVGLTNYGSLMTSVPDLSHFEQMARQAKSEQEKDAVYSKALTEATRKAAPIAACALTSSKEMVKKGLQWFEDQIISEDGNFLVWHQNYEQLKKAPPSFEQLMGYQMSALNWRQSVGYGQLEETAVLVSQVIAQFSVPGTLVVTVQEMIKDMIARRGGGPKRGVSEEHVRCCVDIMNGNLSALINPAWGDIDKKNKNGLMLLTTGIAKLRELYGPAAMVKVQQAADKFGEWGKAQDVLDQSRVQEIHQVLLKSIAESTSFKNQIAQIDSVFSSYYWMWRAGITPESFPLLSDFLFELGQNARGSAKIIKTLDRIGLKWSKPLVNLFADSTFKMGRIHMHPAILTTGRLNEMGLCFGIIPASHPESAVNGSGFAKNILNVRTDGMNPSAQLIVQLFDIQRQSRTLSDLDVVSSEHLFHQILVGKRTAYQNAFQVKGNATDTKIVGFDPP 480
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280   ||  297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477   
                                                                                                                                                                                                                                                                                                                     284|                                                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                      292
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XZ8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XZ8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XZ8)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Gly A:183 - Gly A:184   [ RasMol ]  
 
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  4xz8
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        J3S7E7_9VIRU | J3S7E7: 4xza

(-) Related Entries Specified in the PDB File

4xza 4xzc 4xze