Chain A from PDB Type:PROTEIN Length:1517
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.eeeeee.............eeeee....eeeeee.......hhhhhhhhhhhh....eeeeeee......hhhhhhhhhhh...eeeehhhhhhh........................hhhhhhhhhhhhhhh....eeeeee....hhhhhhhhhhhhhh......eeeeeee..hhhhhhhhhhhhhhh...eeeeee......hhhhh...ee.hhhhhhhhhhhhhh......eeeeeee..hhhhhhhhhhh......eeeee.hhhh.....hhhhhhhhhhhhh........eeeee...eeee...........eeeee........eeeeeehhhhhhhh.....eeeeeeeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.................eeeee..hhhhhhhhhhhhhhhhhhhh..eeeeee.....hhhhhhhhhhhhhh......eeeeeee..............eeee.....hhhhhhhhhhhhh........eeeeeeeee............hhhhhhhhhhhhhhhhhh.hhhhhhhh........eeeeee..........hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhh........eeee.....hhhhhhhhhhhhhhhhhh..hhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhhhhhhh...........eee.hhhhhh..........hhhhhhhhhhhhhh.eeeeee.........hhhhh.....hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhhhhhhhhhhhhh.eeeeeeee......hhhhhhhhh.........eeeeeeee........eeeeee.....hhhhhhhhhhhhhhhhhhh...eee..............hhhhhee..............ee.....hhhhhee.hhhhhhhhhhhhhhhhhhh..hhhhhhh.......hhhhhhhhhh......hhh.eeeeeee..eeeeee.hhhhh....hhhhhh........eeeee..........eee..ee.hhhh...eeeee.eeeee.........eeeee..hhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee.....hhhhhhhhhhhhhhhhh..........eeee...................ee.....eeee..hhhhhh.ee..eehhhhhhhhh..ee......eehhhhh....hhhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4xqk A 12 KQTFDDLINQINTGTLFEKLTLAYLKNEPTYKALYQNVWLLSEVPESYGIPVDLVAEQKNGDLVAIQAKFYTNKVGKSEINSFVAELGKSYYQRGLIVSTMDDWNSNARETIDQNEKGIEIIGLSDLRNSQIDWSQFNFERPENVVVKKPKKLRDYQQTAKENALAHFKENDRGQLIMAPGTGKTFTSLKISEALSKDKDGPFKVLYLVPSIQLLTQTLRGWNNDTELTMTSMAVTSTEDIKASDIGYPATTSSKKILQNWHDFESLPKQTDMLVVFSTYQSIEVIGEAQKEGFPEFDFIISDEAHRTTGAHEAAKEASAFSKVHSNNNVKGLKRMYQTATPKIYGESAKKNAKDKSILLSSMDDESKYGEVFFRMGFGQAVSRDILTDYKVMVLAVDEAAIQKDMQRTLADPENGLNIDDVGRIVGIWNGMMRRNGYKKNSPYDGAPLERAIAFTRTIEESKKVSSQFEEVVNEYISIHLSMRHADGQMNALQKGEVLDWLANPNKPADEARIVSNVRFLTEGIDIPTLDAVIFLSPKKSQVDIVQAVGRIMRKAEGKDYGYIILPIVIPTGEKPETILDNNKNYETVWQVINALRSVDERFEAMIDKLNMAKPKQLKVIGVGSSPDTELEFEWDKFEGAIFGKIVQKVGDRKYLENWSKDVAKIAERQINWIKNKLSDKKDPISLEFKKFVSSLQHNINDSIDEKQAAEMLSQHLITKPIFEALFSEYSFVNQNPVSQAMESIVSELEKAGFAKEQENLEPLYESVRMRAEGIEKAEDKQKIIVTLYDKFFKTAFKATTERLGIVFTPIEVVDFIVHSVDDVLKKHFGKSLASKDVHILDPFTGTGTFIVRTLTYLKEQMDAGEISLADITRKFMKELHANEIVLLSYYIAAINIESTFDEINGDEEGYVPFEGIVLTDTFESTETEDTLDDDYFGTNDERLKRQQKVPITVIMGNPPYSAKQKNEDGNQIRTTYEKLDASLQNSWVETSTATNKNNLFDSYIRAMRWSSDRISDNGVIGFITNNSFIDGNAMDGMRQSLLEEFSDIYVLNLKGGIRGKTKDQSALEGGNIFDIMTGVTIIMLIKKSDYTVEGRIHYLDIGNNLDKYQKLEKLKNWKSLNGATSEFQNIIPNEKGDWINQRNSNFDELISLGNKKGSDSLFIDYTGGLKTGRDNWSWNFSKEQVELSMKSSIDYYNQYLGDTNIYKEDVPDISWTRSLKQRFERRETQSWQGERMYLGMYRPFTKKHVYYAQAWIDRQYQMTKVLPSSTSSNLMISLSNKTGGKQFSTLIVDVLPDVNLFTGGSQNLPKYLYRNNDTGNLFDNSEKYSAIRHEVLNKLPNLSEEDAMYYVYGLFHSIQYGKVYYEDLAKSFPKIPNVKHKEKYIKIGKELADLHLNYENQPICEGIDVQISELNYRVKKMKHPKKGVLDTIIYNESITIKNIPEKAYEYVVNGRPAIEWIINQYQVKTDKKSGITDDPNEFSDDPKYILNLLLSVITVSMRTLELIDELPEFEIQ 1577
21 || 40 50 60 70|| 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 |275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 478 488 498 508 |525 535 545 555 565 575 585 595 605 615 625 635 645 655 665 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570
24| 71| 262| 474| 515| 673|
34 77 273 478 523 689
Chain B from PDB Type:PROTEIN Length:1484
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhh.hhhhhhhhhhhhhhhhhhhheeeee......eeeee....eeeeee.......hhhhhhhhhh.........ee......hhhhhhhh.eehhhhhhh......................hhhhhhhhhhhhhhhh...eeeeee....hhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhhhhh...eeeee......hhhhhh.....hhhhhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhhh.....eeeee.hhhh.......hhhhhhh............eeeee....eee...........eeee.........eeeeeehhhhhhhh.....eeeeeeeeehhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh............eeeee..hhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhh........eeeee..............eeee.....hhhhhhhhhhh..........eeee..eee...............hhhhhhhhhhhhhhh.hhhhhhhhhh......eeeeee........hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh.........eeee.....hhhhhhhhhhhhhhhhh...hhhhhhhhhhhheeeee.hhhhhhhhhhhhhhhhhhhhhhhh.......eee.hhhhhh..........hhhhhhhhhhhhh..eeeeee.........hhhhh.....hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhh..eeeeeeeehhhhhh..hhhhhhhhhhhh.eeeeeeee......hhhhhhhhh.........eeeeeeee........eeeeee.....hhhhhhhhhhhhhhhhhhh...eee..............hhhhhee..............ee.....hhhhhh..hhhhhhhhhhhhhhhhhhh..hhhhhhh.......hhhhhhhhhh......hhh.eeeeeee..eeeeee.hhhhh....hhhhhh........eeeee..........eee..ee........eeeee.eeeee.......eeeee..hhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh....ee....hhhhhhhhhhhhhhhhhh..........eeee...................eee....eeee..hhhhhh.ee..eehhhhhhhhh..ee......eehhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4xqk B 13 QTFDDLINQIGTLFEKLTLAYLKNEPTYKALYQNVWLLSEVDLVAEQKNGDLVAIQAKFYTNKKSEINSFVAELGKSYYQRGLIVSTMDDWNSNARETIEIIGLSDLRNSQIDWSQFNFPENVVVKKPKKLRDYQQTAKENALAHFKENDRGQLIMAPGTGKTFTSLKISEALSKDKDGPFKVLYLVPSIQLLTQTLRGWNNDTELTMTSMAVTTEDIKASDIGYPATTSSKKILQNWHDFESLPKQTDMLVVFSTYQSIEVIGEAQKEGFPEFDFIISDEAHRTTGAHEAAKEASAFSKVHSNNNVKGLKRMYQTATPKIYGESAKKNAKDKSILLSSMDDESKYGEVFFRMGFGQAVSRDILTDYKVMVLAVDEAAIQKDMQRTLADPENGLNIDDVGRIVGIWNGMMRRNGYPYDGAPLERAIAFTRTIEESKKVSSQFEEVVNESIHLSMRHADGQMNALQKGEVLDWLANPNKPADEARIVSNVRFLTEGIDIPTLDAVIFLSPKKSQVDIVQAVGRIMRKAEGKDYGYIILPIVIPTGEKPETILDNNKNYETVWQVINALRSVDERFEAMIDKLNMAKPKQLKVIGVGSSTELEFEWDKFEGAIFGKIVQKVGDRKYLENWSKDVAKIAERQINWIKNKLSDKKDPISLEFKKFVSSLQHNINDSIDEKQAAEMLSQHLITKPIFEALFSEYSFVNQNPVSQAMESIVSELEKAGFAKEQENLEPLYESVRMRAEGIEKAEDKQKIIVTLYDKFFKTAFKATTERLGIVFTPIEVVDFIVHSVDDVLKKHFGKSLASKDVHILDPFTGTGTFIVRTLTYLKEQMDAGEISLADITRKFMKELHANEIVLLSYYIAAINIESTFDEINGDEEGYVPFEGIVLTDTFESTETEDTLDDDYFGTNDERLKRQQKVPITVIMGNPPYSAKQKNEDGNQIRTTYEKLDASLQNSWVETSTATNKNNLFDSYIRAMRWSSDRISDNGVIGFITNNSFIDGNAMDGMRQSLLEEFSDIYVLNLKGGIRGKTKDQSALEGGNIFDIMTGVTIIMLIKKSDYTVEGRIHYLDIGNNLDKYQKLEKLKNWKSLNGATSEFQNIIPNEKGDWINQRNSNFDELISLGNKKGSDSLFIDYTGGLKTGRDNWSWNFSKEQVELSMKSSIDYYNQYLGDTNIYKEDVPDISWTRSLKQRFERRETQSWQGERMYLGMYRPFTKKHVYYAQAWIDRQYQMTKVLPSSTSSNLMISLSNKTGGKQFSTLIVDVLPDVNLFTGGSQNLPKYLYRNNDTGNLNSEKYSAIRHEVLNKLPNLSEEDAMYYVYGLFHSIQYGKVYYEDLAKSFPKIPNVKHKEKYIKIGKELADLHLNYENQPICEGIDVQISELNYRVKKMKHPKKGVLDTIIYNESITIKNIPEKAYEYVVNGRPAIEWIINQYQVKTDKKSGITDDPNEFSDDPKYILNLLLSVITVSMRTLELIDELPEFEIQ 1577
22| 43 53 63|| 86 96 || 108 118 128 145 155 167 177 187 197 207 217 227 237 247 257 || 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 || 485 495 505 524 534 544 554 564 574 584 594 604 614 624 634 644 654 664 |691 701 711 721 731 741 751 761 771 781 791 801 811 821 831 841 851 861 871 881 891 901 911 921 931 941 951 961 971 981 991 1001 1011 1021 1031 1041 1051 1061 1071 1081 1091 1101 1111 1121 1131 1141 1151 1161 1171 1181 1191 1201 1211 1221 1231 1241 1251 1261 1271 1281 1291 1301 1311 1321 1331 1341 1351 1361 1371 1381|| 1393 1403 1413 1423 1433 1443 1453 1463 1473 1483 1493 1503 1513 1523 1533 1543 1553 1563 1573
22| 64| 99| 137| 164| 261| 473| 513| 671| 1382|
34 78 102 145 167 273 481 523 689 1385
Chain C from PDB Type:DNA Length:28
4xqk C 1 CACCTCGGCTCAGTCTATTAGCTAGAGC 28
10 20
Chain D from PDB Type:DNA Length:28
4xqk D 1 GCTCTAGCTAATAGACTGAGCCGAGGTG 28
10 20
Chain E from PDB Type:DNA Length:28
4xqk E 1 CACCTCGGCTCAGTCTATTAGCTAGAGC 28
10 20
Chain F from PDB Type:DNA Length:28
4xqk F 1 GCTCTAGCTAATAGACTGAGCCGAGGTG 28
10 20
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |