4XMG - JenaLib

Title :   CRYSTAL STRUCTURE OF NITROPHORIN 7 FROM RHODNIUS PROLIXUS AT PH 7.8 COMPLEXED WITH IMIDAZOLE

Authors :   H. Ogata

Date :   14 Jan 15 (Deposition) - 29 Jul 15 (Release) - 29 Jul 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.80

Chains :   Asym./Biol. Unit : A

Keywords :   Heme, No Transporter, Oxidoreductase, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. Knipp, H. Ogata, G. Soavi, G. Cerullo, A. Allegri, S. Abbruzzetti, S. Bruno, C. Viappiani, A. Bidon-Chanal, F. J. Luque
Structure And Dynamics Of The Membrane Attaching Nitric Oxide Transporter Nitrophorin 7.
F1000Res V. 4 45 2015
PubMed-ID: 26167269 | Reference-DOI: 10.12688/F1000RESEARCH.6060.1

Compounds

Molecule 1 - NITROPHORIN-7
	Chains	:	A
	EC Number	:	1.7.6.1
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Fragment	:	UNP RESIDUES 22-105
	Organism Common	:	TRIATOMID BUG
	Organism Scientific	:	RHODNIUS PROLIXUS
	Organism Taxid	:	13249
	Synonym	:	NP7,NITRITE DISMUTASE

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 2)

Sites (2, 2)

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLU A:27 , TYR A:30 , PHE A:41 , PHE A:43 , PHE A:45 , LEU A:58 , HIS A:60 , PHE A:88 , TYR A:107 , ILE A:121 , ILE A:123 , LEU A:135 , SER A:137 , IMD A:202 , HOH A:382	binding site for residue HEM A 201
2	AC2	SOFTWARE	ILE A:123 , LEU A:125 , LEU A:135 , HEM A:201 , HOH A:322	binding site for residue IMD A 202

SS Bonds (2, 2)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
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Chain A from PDB  Type:PROTEIN  Length:184
                                                                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhh...eeeeeeee........eeeeeeeeee..eeeeeeeeee....eeeeeeeeee......eeeeeeeee.....eee.....eeeeeeeeeee..eeeeeeeeee..eeeeeeeeeee.......hhhhhhhhhhh..hhhhhee........hhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xmg A   2 PGECSVNVIPKKNLDKAKFFSGTWYETHYLDMDPQATEKFCFSFAPRESGGTVKEALYHFNVDSKVSFYNTGTGPLESNGAKYTAKFNTVDKKGKEIKPADEKYSYTVTVIEAAKQSALIHICLQEDGKDIGDLYSVLNRNKNALPNKKIKKALNKVSLVLTKFVVTKDLDCKYDDKFLSSWQK 185
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (14, 14)

Visualization

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	Cis Peptide Bonds
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Still Images

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Description