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(-) Description

Title :  CRYSTAL STRUCTURE OF GENOMES UNCOUPLED 4 (GUN4) IN COMPLEX WITH DEUTEROPORPHYRIN IX
 
Authors :  X. Chen, H. Pu, L. Liu
Date :  11 Jan 15  (Deposition) - 20 May 15  (Release) - 22 Jul 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Gun4, Deuteroporphyrin, Porphyrin-Binding, Ligand Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Chen, H. Pu, X. Wang, W. Long, R. Lin, L. Liu
Crystal Structures Of Gun4 In Complex With Porphyrins.
Mol Plant V. 8 1125 2015
PubMed-ID: 25958236  |  Reference-DOI: 10.1016/J.MOLP.2015.04.013

(-) Compounds

Molecule 1 - YCF53-LIKE PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: SLL0558
    Organism Scientific: SYNECHOCYSTIS SP. (STRAIN PCC 6803 / KAZUSA)
    Organism Taxid: 1111708
    Strain: PCC 6803 / KAZUSA
    Synonym: GUN4

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1DE91Ligand/Ion3,3'-(3,7,12,17-TETRAMETHYLPORPHYRIN-2,18-DIYL)DIPROPANOIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:87 , ALA A:88 , GLY A:90 , ARG A:113 , LYS A:172 , TRP A:183 , TRP A:189 , TRP A:192 , PHE A:196 , ASN A:211 , GLN A:212 , HOH A:412 , HOH A:431 , HOH A:454 , HOH A:456 , HOH A:576 , HOH A:606 , HOH A:608binding site for residue DE9 A 300

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4XKB)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Val A:46 -Pro A:47
2Trp A:192 -Pro A:193
3Leu A:207 -Pro A:208

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XKB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XKB)

(-) Exons   (0, 0)

(no "Exon" information available for 4XKB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:225
                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.hhhhhhhhhhhh..............hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhh.hhhhhhhhhhhhhhh.....hhhhhhhhhhh...hhhhhhhhh..ee..ee..........................hhhhhhhhh.hhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4xkb A   3 DNLTELSQQLKQLTAIAALAEMGEGGQGILLDYLAKNVPLEKPVLAVGNVYQTLRNLEQETITTQLQRNYPTGIFPLQSAQGIDYLPLQEALGSQDFETADEITRDKLCELAGPGASQRQWLYFTEVEKFPALDLHTINALWWLHSNGNFGFSVQRRLWLASGKEFTKLWPKIGWKSGNVWTRWPKGFTWDLSAPQGHLPLLNQLRGVRVAESLYRHPVWSQYGW 233
                                    12|       28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228     
                                    12|                                                                                                                                                                                                                      
                                     19
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XKB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4XKB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4XKB)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4XKB)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        YC53L_SYNY3 | P72583: 1y6i 4xkc

(-) Related Entries Specified in the PDB File

4xkc