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(-) Description

Title :  CRYSTAL STRUCTURE OF BOVINE G PROTEIN COUPLED-RECEPTOR KINASE 5 IN COMPLEX WITH CCG215022
 
Authors :  K. T. Homan, J. J. G. Tesmer
Date :  13 Oct 14  (Deposition) - 10 Jun 15  (Release) - 02 Sep 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.42
Chains :  Asym./Biol. Unit :  A
Keywords :  G Protein-Coupled Receptor Kinase 5, Hydrolase, Phosphorylation, Cardiovascular Disease, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. T. Homan, H. V. Waldschmidt, A. Glukhova, A. Cannavo, J. Song, J. Y. Cheung, W. J. Koch, S. D. Larsen, J. J. Tesmer
Crystal Structure Of G Protein-Coupled Receptor Kinase 5 In Complex With A Rationally Designed Inhibitor.
J. Biol. Chem. V. 290 20649 2015
PubMed-ID: 26032411  |  Reference-DOI: 10.1074/JBC.M115.647370

(-) Compounds

Molecule 1 - G PROTEIN-COUPLED RECEPTOR KINASE 5
    Chains: A
    EC Number: 2.7.11.16
    Engineered: YES
    Expression System: TRICHOPLUSIA NI
    Expression System Plasmid: PFASTBACDUAL
    Expression System Taxid: 7111
    Expression System Vector Type: PLASMID
    Gene: GRK5, GPRK5
    Organism Common: BOVINE
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: G PROTEIN-COUPLED RECEPTOR KINASE GRK5

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
14531Ligand/Ion(4S)-4-{4-FLUORO-3-[(PYRIDIN-2-YLMETHYL)CARBAMOYL]PHENYL}-N-(1H-INDAZOL-5-YL)-6-METHYL-2-OXO-1,2,3,4-TETRAHYDROPYRIMIDINE-5-CARBOXAMIDE
2SO41Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:192 , GLY A:193 , LYS A:194 , GLY A:195 , GLY A:196 , PHE A:197 , GLY A:198 , VAL A:200 , ALA A:213 , LYS A:215 , LEU A:217 , MET A:230 , GLU A:234 , THR A:264 , ILE A:265 , MET A:266 , GLU A:315 , ASN A:316 , LEU A:318 , SER A:328 , ASP A:329 , HOH A:804 , HOH A:817binding site for residue 453 A 701
2AC2SOFTWARELYS A:183 , THR A:255 , LYS A:256 , HOH A:837binding site for residue SO4 A 702

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4WNK)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4WNK)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4WNK)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4WNK)

(-) Exons   (0, 0)

(no "Exon" information available for 4WNK)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:499
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhh...hhhhhhhhhhh...hhhhhhh.hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...........hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhh.eeeeeeeee...eeeeeeee.....eeeeeeeehhhhhhh.hhhhhhhhhhhhhhh.......eeeeee...eeeeee......hhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee.................hhhhhh.....hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh......hhhhhhhhhhhh..hhhhhhh................hhhhhhhhhh.eehhhhhhhhhhhhhhhhhhh........hhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wnk A  24 KGKSKKWKEILKFPHINQCEDLRRTIDRDYCSLCDKQPVGRLLFRQFCETRPGLESYIQFLDSVAEYEVTPDEKLGEKGKEIMTKYLTPKSPVFITQVGRDLVSQTEEKLLQKPCKELFSACVQSVHDYLRGEPFHEYLDSMYFDRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSRFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHHENIVYRDLKPENILLDDYGHIRISDLGLAVKIPEGDLIRGRVGTVGYMAPEVLNNQRYGLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSHKFSEEAKSICKMLLTKDAKQRLGCQEEGAAEVKRHPFFRNMNFKRLEAGMLDPPFVPDPRAVYHTDDDFYSKFSTGSVPIPWQSEMIETECFKELNVFGPHGTLSPDLNRSH 575
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473|      502       512       522       532      |||
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           473|                                           539||
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            493                                            572|
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            575
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4WNK)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4WNK)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4WNK)

(-) Gene Ontology  (26, 26)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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(-) Related Entries Specified in the PDB File

3nyn 3NYN CONTAINS GRK6, A RELATED FAMILY MEMBER, IN COMPLEX WITH SANGIVAMYCIN
4mko 4MKO CONTAINS GRK1, A RELATED FAMILY MEMBER, IN COMPLEX WITH A RATIONALLY DESIGNED INHIBITOR