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(-) Description

Title :  CRYSTAL STRUCTURE OF PET-DEGRADING CUTINASE CUT190 S226P MUTANT IN CA(2+)-BOUND STATE AT 2.35 ANGSTROM RESOLUTION
 
Authors :  T. Miyakawa, H. Mizushima, J. Ohtsuka, M. Oda, F. Kawai, M. Tanokura
Date :  15 Sep 14  (Deposition) - 24 Dec 14  (Release) - 20 May 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.35
Chains :  Asym./Biol. Unit :  A
Keywords :  Cutinase, Polyesterase, Alpha/Beta-Hydrolase Fold (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Miyakawa, H. Mizushima, J. Ohtsuka, M. Oda, F. Kawai, M. Tanokura
Structural Basis For The Ca(2+)-Enhanced Thermostability An Activity Of Pet-Degrading Cutinase-Like Enzyme From Saccharomonospora Viridis Ahk190.
Appl. Microbiol. Biotechnol. V. 99 4297 2015
PubMed-ID: 25492421  |  Reference-DOI: 10.1007/S00253-014-6272-8

(-) Compounds

Molecule 1 - CUTINASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: ROSETTA-GAMI B (DE3)
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 47-304
    Gene: CUT190
    Mutation: YES
    Organism Scientific: SACCHAROMONOSPORA VIRIDIS
    Organism Taxid: 1852
    Strain: AHK190

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1CA1Ligand/IonCALCIUM ION
2CL1Ligand/IonCHLORIDE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:76 , ALA A:78 , PHE A:81 , ASN A:133 , HOH A:510 , HOH A:523binding site for residue CA A 401
2AC2SOFTWARETHR A:223 , HIS A:254binding site for residue CL A 402

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:287 -A:302

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Cys A:287 -Pro A:288
2Cys A:302 -Pro A:303

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4WFK)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4WFK)

(-) Exons   (0, 0)

(no "Exon" information available for 4WFK)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:258
                                                                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........hhhhh......eeeeee.........eeeeee.......eeeeeee.....hhhhhhhhhhhhhh...eeeee.......hhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeehhhhhhhhhhhhhh....eeeee...............eeeeee..........hhhhhhhhh.....eeeeee.....hhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhh.......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4wfk A  47 NPYERGPDPTEDSIEAIRGPFSVATERVSSFASGFGGGTIYYPRETDEGTFGAVAVAPGFTASQGSMSWYGERVASQGFIVFTIDTNTRLDQPGQRGRQLLAALDYLVERSDRKVRERLDPNRLAVMGHSMGGGGSLEATVMRPSLKASIPLTPWNLDKTWGQVQVPTFIIGAELDTIAPVRTHAKPFYESLPSSLPKAYMELDGATHFAPNIPNTTIAKYVISWLKRFVDEDTRYSQFLCPNPTDRAIEEYRSTCPY 304
                                    56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4WFK)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4WFK)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4WFK)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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        W0TJ64_9PSEU | W0TJ64: 4wfi 4wfj

(-) Related Entries Specified in the PDB File

4wfi 4wfj