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(-) Description

Title :  CRYSTAL STRUCTURE OF THE DYNEIN LIGHT INTERMEDIATE CHAIN'S CONSERVED DOMAIN
 
Authors :  C. M. Schroeder, D. C. Ekiert, R. D. Vale
Date :  22 Aug 14  (Deposition) - 01 Oct 14  (Release) - 26 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Molecular Motor, G Protein, Intracellular Motility, Dynein Subunit (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. M. Schroeder, J. M. Ostrem, N. T. Hertz, R. D. Vale
A Ras-Like Domain In The Light Intermediate Chain Bridges The Dynein Motor To A Cargo-Binding Region.
Elife V. 3 03351 2014
PubMed-ID: 25272277  |  Reference-DOI: 10.7554/ELIFE.03351

(-) Compounds

Molecule 1 - DYNEIN LIGHT INTERMEDIATE CHAIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEX-6P-1
    Expression System Strain: BL21 DE3 RIPL
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: CTHT_0010980
    Organism Scientific: CHAETOMIUM THERMOPHILUM
    Organism Taxid: 759272
    Strain: DSM 1495 / CBS 144.50 / IMI 039719

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4W7G)

(-) Sites  (0, 0)

(no "Site" information available for 4W7G)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4W7G)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Tyr A:344 -Pro A:345

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4W7G)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4W7G)

(-) Exons   (0, 0)

(no "Exon" information available for 4W7G)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:298
                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee.hhhhhhhhhhhhhh.......eeeeeeee......eeeeeeeeee...hhhhhhhhhhhh...hhh.eeeeeeee..hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..............................eeeeee.hhhhhhhhhhh..hhhhhhhhhhhhhhhhhh...eeee.......hhhhhhhhhh.....................ee.....hhhhhhhh....hhhhhhhhhhhhhh..........hhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4w7g A  44 RLPEKNIILLGGTVDSQREFFEALSSNDRRFALGYTYYDVLDADHEDTLARISIYTLTDPSPAFASLLQPILTPDSIPNTLIVILLDWSQPWKWMRQLREWILLLRTVLVSLSHECKATMEEVMLSWRDRGRGGGINLDGSMTLPLGPGEWEDGLGLPLCVVCQNAEKMEYLEKTQGWKEEEFDVVLQFMRTVLLKHGASLIYTTPSVPSQLPSLIHSSLGIHSLLKKQPLKHNVIERDKIVVPPNWDSWGKIRVLREGFDVERVSNGWSVDLDQPYPLPDPEGSTVVLYEEAVQDPT 394
                                    53        63        73|       98       108       118       128       138       148       158       168       178       188       198  ||   217       227       237       247       257       267       277       287       297       307       317       327       337       376       386        
                                                        73|                                                                                                             201|                                                                                                                                   345|                   
                                                         89                                                                                                              211                                                                                                                                    375
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4W7G)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4W7G)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4W7G)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Tyr A:344 - Pro A:345   [ RasMol ]  
 

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 Related Entries

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