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(-) Description

Title :  KINETIC CRYSTALLOGRAPHY OF ALPHA_E7-CARBOXYLESTERSE FROM LUCILLA CUPRINA - ABSORBED X-RAY DOSE 11.09 MGY TEMP 150K
 
Authors :  C. J. Jackson, P. D. Carr, M. Weik, T. Huber, T. Meirelles, G. Correy
Date :  14 Aug 14  (Deposition) - 19 Aug 15  (Release) - 22 Jun 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A
Keywords :  Alpha/Beta Hydrolase Fold, Carboxylesterase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. J. Correy, P. D. Carr, T. Meirelles, P. D. Mabbitt, N. J. Fraser, M. Weik, C. J. Jackson
Mapping The Accessible Conformational Landscape Of An Insec Carboxylesterase Using Conformational Ensemble Analysis And Kinetic Crystallography
Structure V. 24 977 2016
PubMed-ID: 27210287  |  Reference-DOI: 10.1016/J.STR.2016.04.009

(-) Compounds

Molecule 1 - E3
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PETMCSIII
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: LCAE7
    Mutation: YES
    Organism Common: GREEN BOTTLE FLY
    Organism Scientific: LUCILIA CUPRINA
    Organism Taxid: 7375
    Strain: LS2

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1DPF1Ligand/IonDIETHYL HYDROGEN PHOSPHATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:136 , GLY A:137 , SER A:218 , ALA A:219 , TRP A:251 , PHE A:354 , TYR A:457 , HIS A:471 , THR A:472binding site for residue DPF A 601

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4W1S)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4W1S)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4W1S)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4W1S)

(-) Exons   (0, 0)

(no "Exon" information available for 4W1S)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:566
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhheeeeeeee.....eeeeeeee.....eeeeeeeee.....hhhhh............eee.........ee......ee......eeeeee........eeeeeee..........hhhhhh..hhhhh..eeeee...hhhhhhh...........hhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeehhhhhhhhhhhhhhhhh....eeeee.....hhhhh....hhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhh......................hhhhhhhhhhhhhh.eeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeee.........hhhhhh..........hhhhhhh............hhhhhhhhhhhhhhhhhhhhh.........................eeeee...eeeee..hhhhhhhhhhh...hhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4w1s A   5 VSLMEKLKWKIKCIENKFLNYRLTTNETVVAETEYGKVKGVKRLTVYDDSYYSFEGIPYAQPPVGELRFKAPQRPTPWDGVRDCCNHKDKSVQVDFITGKVCGSEDCLYLSVYTNNLNPETKRPVLVYIHGGGFIIGENHRDMYGPDYFIKKDVVLINIQYRLGALGFLSLNSEDLNVPGNAGLKDQVMALRWIKNNCANFGGNPDNITVFGESAGAASTHYMMLTEQTRGLFHRGILMSGNAICPWANTQCQHRAFTLAKLAGYKGEDNDKDVLEFLMKAKPQDLIKLEEKVLTLEERTNKVMFPFGPTVEPYQTADCVLPKHPREMVKTAWGNSIPTMMGNTSYEGLFFTSILKQMPLLVKELETCVNFVPSELADAERTAPETLEMGAKIKKAHVTGETPTADNFMDLCSHFYFWFPMHRLLQLRFNHTSGTPVYLYRFDFDSEDLINPYRIMRSGRGVKGVSHTDELTYFFWNQLAKRMPKESREYKTIERMTGIWTQFATTGNPYSNEIEGMENVSWDPIEKSDEVYKCLNISDELKMIDVPEMGKIKQWESMFEKHRDLF 570
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4W1S)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4W1S)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4W1S)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)

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  Q25252_LUCCU | Q25252
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q25252_LUCCU | Q25252: 4fng 4fnm 4qwm 4ubi 4ubj 4ubk 4ubl 4ubm 4ubn 4ubo 4w1p 4w1q 4w1r 5c8v 5ch3 5ch5 5ikx 5ivd 5ivh 5ivi 5ivk

(-) Related Entries Specified in the PDB File

4qwm 4QWM CONTAINS THE SAME PROTEIN COLLECTED AT A TOTAL ABSORBED DOSE OF 1.85 MGY AT 100K
4ubi 4UBI CONTAINS THE SAME PROTEIN COLLECTED AT A TOTAL ABSORBED DOSE OF 3.70 MGY AT 100K
4ubj 4UBJ CONTAINS THE SAME PROTEIN COLLECTED AT A TOTAL ABSORBED DOSE OF 5.55 MGY AT 100K
4ubk 4UBK CONTAINS THE SAME PROTEIN COLLECTED AT A TOTAL ABSORBED DOSE OF 7.40 MGY AT 100K
4ubl 4UBL CONTAINS THE SAME PROTEIN COLLECTED AT A TOTAL ABSORBED DOSE OF 9.26 MGY AT 100K
4ubm 4UBM CONTAINS THE SAME PROTEIN COLLECTED AT A TOTAL ABSORBED DOSE OF 11.11 MGY AT 100K
4ubn 4UBN CONTAINS THE SAME PROTEIN COLLECTED AT A TOTAL ABSORBED DOSE OF 1.85 MGY AT 150K
4ubo 4UBO CONTAINS THE SAME PROTEIN COLLECTED AT A TOTAL ABSORBED DOSE OF 3.70 MGY AT 150K