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(-) Description

Title :  CRYSTAL STRUCTURE OF THE TTIFT52-46 COMPLEX
 
Authors :  P. Braeuer, M. Taschner, E. Lorentzen
Date :  09 Sep 14  (Deposition) - 05 Nov 14  (Release) - 05 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.32
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Motor Protein, Cilium, Ift, Intracellular Transport, Flagellum (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Taschner, F. Kotsis, P. Braeuer, E. W. Kuehn, E. Lorentzen
Crystal Structures Of Ift70/52 And Ift52/46 Provide Insight Into Intraflagellar Transport B Core Complex Assembly.
J. Cell Biol. V. 207 269 2014
PubMed-ID: 25349261  |  Reference-DOI: 10.1083/JCB.201408002

(-) Compounds

Molecule 1 - INTRAFLAGELLAR TRANSPORT COMPLEX B PROTEIN 46 CARBOXY-TERMINAL PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Fragment: C-TERMINAL DOMAIN, RESIDUES 221-332
    Organism Scientific: TETRAHYMENA THERMOPHILA
    Organism Taxid: 5911
    Synonym: INTRAFLAGELLAR TRANSPORT PROTEIN 46
 
Molecule 2 - INTRAFLAGELLAR TRANSPORTER-LIKE PROTEIN
    Chains: B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Fragment: C-TERMINAL DOMAIN, RESIDUES 371-434
    Organism Scientific: TETRAHYMENA THERMOPHILA
    Organism Taxid: 5911
    Synonym: INTRAFLAGELLAR TRANSPORT PROTEIN 52

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Gln A:314 -Pro A:315

 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:108
                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhh.............hhhhh..hhhhhhhhh...........hhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 4uzz A 233 AASPKQIQMWINNVAEIRKTKQPHSVSYTKPMPEIDELMQEWPQEIEEILQHLKIPSEELDFNLSDFCKLACAILDIPVHDQPNESNVIESLHVLFTLYSEFKSNQHF 340
                                   242       252       262       272       282       292       302       312       322       332        


Chain B from PDB  Type:PROTEIN  Length:65
                                                                                                 
               SCOP domains ----------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------- Transcript
                 4uzz B 538 ASDEFASEKVRLAQLTNKCNNNDLDYYIKESGDILGVTDKVKNKHDAKAILRYVLEELINFKKLN 602
                                   547       557       567       577       587       597
   Legend:   → Mismatch (orange background)
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) Gene Ontology  (5, 6)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Gln A:314 - Pro A:315   [ RasMol ]  
 

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