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(-) Description

Title :  STRUCTURE OF HUMAN ROS1 KINASE DOMAIN IN COMPLEX WITH PF-06463922
 
Authors :  M. Mctigue, Y. Deng, W. Liu, A. Brooun, A. Stewart
Date :  25 Aug 14  (Deposition) - 11 Mar 15  (Release) - 15 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Transferase, Inhibitor, Ros (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Y. Zou, Q. Li, L. D. Engstrom, M. West, V. Appleman, K. A. Wong, M. Mctigue, Y. Deng, W. Liu, A. Brooun, S. Timofeevski, S. R. P. Mcdonnell, P. Jiang, M. D. Falk, P. B. Lappin, T. Affolter, T. Nichols, W. Hu, J. Lam, T. W. Johnson, T. Smeal, A. Charest, V. R. Fantin
Pf-06463922 Is A Potent And Selective Next-Generation Ros1/Alk Inhibitor Capable Of Blocking Crizotinib-Resistant Ros1 Mutations.
Proc. Natl. Acad. Sci. Usa V. 112 3493 2015
PubMed-ID: 25733882  |  Reference-DOI: 10.1073/PNAS.1420785112

(-) Compounds

Molecule 1 - PROTO-ONCOGENE TYROSINE-PROTEIN KINASE ROS
    Chains: A
    EC Number: 2.7.10.1
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell Line: SF21
    Expression System Common: FALL ARMYWORM
    Expression System Plasmid: PFASTBAC
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: KINASE DOMAIN, UNP RESIDUES 1934-2232
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: PROTO-ONCOGENE C-ROS, PROTO-ONCOGENE C-ROS-1, RECEPTOR TYROSINE KINASE C-ROS ONCOGENE 1, C-ROS RECEPTOR TYROSINE KINASE

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
15P81Ligand/Ion(10R)-7-AMINO-12-FLUORO-2,10,16-TRIMETHYL-15-OXO-10,15,16,17-TETRAHYDRO-2H-8,4-(METHENO)PYRAZOLO[4,3-H][2,5,11]BENZOXADIAZACYCLOTETRADECINE-3-CARBONITRILE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
15P82Ligand/Ion(10R)-7-AMINO-12-FLUORO-2,10,16-TRIMETHYL-15-OXO-10,15,16,17-TETRAHYDRO-2H-8,4-(METHENO)PYRAZOLO[4,3-H][2,5,11]BENZOXADIAZACYCLOTETRADECINE-3-CARBONITRILE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:1951 , VAL A:1959 , ALA A:1978 , LEU A:2026 , GLU A:2027 , LEU A:2028 , MET A:2029 , GLU A:2030 , GLY A:2032 , ARG A:2083 , ASN A:2084 , LEU A:2086 , GLY A:2101 , ASP A:2102 , HOH A:4046BINDING SITE FOR RESIDUE 5P8 A3230

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4UXL)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Phe A:1956 -Gly A:1957
2Glu A:2020 -Pro A:2021

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4UXL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4UXL)

(-) Exons   (0, 0)

(no "Exon" information available for 4UXL)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:289
                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhh.eeeeeeee......eeeeeee........eeeeeeeee....hhhhhhhhhhhhhhhhhh.......eeeee.....eeeeee.....hhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee..........eee......ee.......hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhh.........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4uxl A 1934 IENLPAFPREKLTLRLLLGSGAFGEVYEGTAVDILGVGSGEIKVAVKTLKKGSTDQEKIEFLKEAHLMSKFNHPNILKQLGVCLLNEPQYIILELMEGGDLLTYLRKARMATFYGPLLTLVDLVDLCVDISKGCVYLERMHFIHRDLAARNCLVSVKDYTSPRIVKIGDFGLARDIYKEGLLPVRWMAPESLMDGIFTTQSDVWSFGILIWEILTLGHQPYPAHSNLDVLNYVQTGGRLEPPRNCPDDLWNLMTQCWAQEPDQRPTFHRIQDQLQLFRNFFLNSIYKSR 2230
                                  1943      1953      1963      1973      1983      1993      2003      2013      2023      2033      2043      2053      2063      2073      2083      2093      2103      2121      2131      2141      2151      2161      2171      2181      2191      2201      2211      2221         
                                                                                                                                                                                                          2111|                                                                                                              
                                                                                                                                                                                                           2120
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4UXL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4UXL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4UXL)

(-) Gene Ontology  (28, 28)

Asymmetric Unit(hide GO term definitions)

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  4uxl
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  ROS1_HUMAN | P08922
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 Related Entries

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        ROS1_HUMAN | P08922: 3zbf

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