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(-) Description

Title :  COHESIN SMC3-HD:SCC1-N COMPLEX FROM YEAST
 
Authors :  T. G. Gligoris, K. Nasmyth, J. Lowe
Date :  18 Aug 14  (Deposition) - 03 Dec 14  (Release) - 03 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.30
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Protein Binding, Cohesin, Mitosis, Chromosome Segregation, Kleisin, Smc (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. G. Gligoris, J. C. Scheinost, F. Burmann, N. Petela, K. Chan, P. Uluocak, F. Beckouet, S. Gruber, K. Nasmyth, J. Lowe
Closing The Cohesin Ring: Structure And Function Of Its Smc3-Kleisin Interface.
Science V. 346 963 2014
PubMed-ID: 25414305  |  Reference-DOI: 10.1126/SCIENCE.1256917

(-) Compounds

Molecule 1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: HEAD DOMAIN WITH COILED COIL SEGMENT, RESIDUES 2-261 AND RESIDUES 970-1230
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: DA-BOX PROTEIN SMC3, SMC3
 
Molecule 2 - MITOTIC CHROMOSOME DETERMINANT-RELATED PROTEIN
    Chains: B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: N-TERMINAL DOMAIN, RESIDUES 1-155
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: SCC1

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1AGS1Ligand/IonPHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
2MG1Ligand/IonMAGNESIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:39 , GLU A:1155 , AGS A:9999BINDING SITE FOR RESIDUE MG A8999
2AC2SOFTWARELYS A:12 , THR A:13 , GLY A:35 , GLY A:37 , LYS A:38 , SER A:39 , ASN A:40 , GLY A:63 , LEU A:64 , HIS A:66 , GLN A:67 , GLU A:1155 , MG A:8999BINDING SITE FOR RESIDUE AGS A9999

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4UX3)

(-) Cis Peptide Bonds  (5, 5)

Asymmetric/Biological Unit
No.Residues
1Asn A:22 -Phe A:23
2Ala A:135 -Gly A:136
3Gly A:136 -Phe A:137
4Pro A:147 -Gln A:148
5Ser B:60 -Gly B:61

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4UX3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4UX3)

(-) Exons   (0, 0)

(no "Exon" information available for 4UX3)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:436
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee..eeee.........eeeeee....hhhhhhhhhhhhhh......hhhhhhhhh...........eeee....................hhhhhhhhhhh..........ee....hhhhh..hhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee..eeeee.......ee....hhhhhhhhhhhhhhhhhh.....eeee.......hhhhhhhhhhhhhhhhh..eeeee..hhhhh......eeeeee..eeeee..hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ux3 A    2 YIKRVIIKGFKTYRNETIIDNFSPHQNVIIGSNGSGKSNFFAAIRFVLSDDYSNLKREERQGLIHQGSGGSVMSASVEIVIRRTVGLKKDDYQLNDRNVTKGDIVRMLETAGFSMNNPYNIVPQGKIVALTNAKDKERLQLLEDVVGAKSFEVKLKASLKKMEETEQKKIQINKEMGELNSKLSEMEQERKELEKYNELERNRKIYQFTLYDRELNEVINQMETSDQLLQRLNDMNTEISGLKNVNKRAFENFKKFNERRKDLAERASELDESKDSIQDLIVKLKQQKVNAVDSTFQKVSENFEAVFERLVPRGTAKLIIHSISVSFNSKQNEQLHVEQLSGGQKTVCAIALILAIQMVDPASFYLFDEIDAALDKQYRTAVATLLKELSKNAQFICTTFRTDMLQVADKFFRVKYENKISTVIEVNREEAIGFIR 1222
                                    11        21        31        41        51        61        71        81|      114       124       134       144       154       164       174       184       194       204       214       224       234       244  ||   979       989       999      1009      1019      1029      1039      1049      1059      1069||    1116      1126      1136      1146      1156      1166      1176      1186      1196      1206      1216      
                                                                                                          81|                                                                                                                                           247|                                                                                             1070|                                                                                                                  
                                                                                                          105                                                                                                                                            973                                                                                              1108                                                                                                                  


Chain B from PDB  Type:PROTEIN  Length:71
                                                                                                        
               SCOP domains ----------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh......hhhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------- Transcript
                4ux3 B   25 WLASNMSIQTHIAESAKEIAKASGCDDESGDNEYITLRTSGELLQGIVRVYSKQATFLLTDIKDTLTKISM  102
                                  ||41        51        61        71        81        91       101 
                                 31|                                                               
                                  39
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4UX3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4UX3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4UX3)

(-) Gene Ontology  (31, 40)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Ala A:135 - Gly A:136   [ RasMol ]  
    Asn A:22 - Phe A:23   [ RasMol ]  
    Gly A:136 - Phe A:137   [ RasMol ]  
    Pro A:147 - Gln A:148   [ RasMol ]  
    Ser B:60 - Gly B:61   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SCC1_YEAST | Q12158: 1w1w 5frp 5frs

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4UX3)