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(-) Description

Title :  CRYSTAL STRUCTURE OF LEISHMANIA MAJOR N-MYRISTOYLTRANSFERASE (NMT) WITH BOUND MYRISTOYL-COA AND A FRAGMENT
 
Authors :  D. A. Robinson, P. G. Wyatt
Date :  04 Dec 14  (Deposition) - 13 May 15  (Release) - 20 May 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Acyltransferase, Transferase, Drug Discovery (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. A. Robinson, P. G. Wyatt
Identification And Structure Solution Of Fragment Hits Against Kinetoplastid N-Myristoyltransferase
Acta Crystallogr. , Sect. F V. 71 586 2015
PubMed-ID: 25945713  |  Reference-DOI: 10.1107/S2053230X15003040

(-) Compounds

Molecule 1 - GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE
    Chains: A
    EC Number: 2.3.1.97
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: RESIDUES 4-421
    Organism Scientific: LEISHMANIA MAJOR
    Organism Taxid: 5664

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
19X31Ligand/IonN-METHYL-1-[3-(MORPHOLIN-4-YLMETHYL)PHENYL]METHANAMINE
2MYA1Ligand/IonTETRADECANOYL-COA

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:82 , PHE A:90 , TYR A:92 , THR A:203 , GLY A:205 , TYR A:217 , MET A:420 , LEU A:421 , HOH A:2111 , HOH A:2208 , HOH A:2392BINDING SITE FOR RESIDUE 9X3 A1422
2AC2SOFTWAREHIS A:12 , ALA A:13 , PHE A:14 , TRP A:15 , ASN A:79 , TYR A:80 , VAL A:81 , PHE A:168 , LEU A:169 , CYS A:170 , VAL A:171 , ARG A:176 , GLU A:177 , LYS A:178 , ARG A:179 , LEU A:180 , ALA A:181 , PRO A:182 , THR A:189 , VAL A:192 , TRP A:198 , ALA A:200 , TYR A:202 , THR A:203 , LEU A:208 , TYR A:404 , HOH A:2001 , HOH A:2210 , HOH A:2219 , HOH A:2393 , HOH A:2394 , HOH A:2395 , HOH A:2396 , HOH A:2397 , HOH A:2398 , HOH A:2399 , HOH A:2400BINDING SITE FOR RESIDUE MYA A1423

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4UCP)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Pro A:209 -Thr A:210

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4UCP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4UCP)

(-) Exons   (0, 0)

(no "Exon" information available for 4UCP)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:411
                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhh....hhhhhhhh..........hhhhh..........eeee.....hhhhhhhhhhhhhhhh.......eee..hhhhhhhhhh....hhh.eeeeee.....eeeeeeeeeeeee...hhhhhhhhhhhhhhhhhhh....eeeeeeeeeee.hhhh..hhhhhhhhhhhhhhhh.....eeeee........eeeeeeeee.hhhhhhhh.....hhhhhhh.hhhhhhhhhhh.........eee.hhhhhhhhhhhhhhhhh....ee..hhhhhhhhhh.....eeeeeeee..eeeeeeeeeeeeeee.......eeeeeeeeeeee...hhhhhhhhhhhhhhhh...eeeee...hhhhhh.....eeeeeeeeeeee.......hhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ucp A  11 AHAFWSTQPVPQTEDETEKIVFAGPMDEPKTVADIPEEPYPIASTFEWWTPNMEAADDIHAIYELLRDNYVEDDDSMFRFNYSEEFLQWALCPPNYIPDWHVAVRRKADKKLLAFIAGVPVTLRMGTPKYMKVKAQEKGEGEEAAKYDEPRHICEINFLCVHKQLREKRLAPILIKEATRRVNRTNVWQAVYTAGVLLPTPYASGQYFHRSLNPEKLVEIRFSGIPAQYQKFQNPMAMLKRNYQLPSAPKNSGLREMKPSDVPQVRRILMNYLDSFDVGPVFSDAEISHYLLPRDGVVFTYVVENDKKVTDFFSFYRIPSTVIGNSNYNLLNAAYVHYYAATSIPLHQLILDLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGDGHLRYYFYNWAYPKIKPSQVALVML 421
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4UCP)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4UCP)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4UCP)

(-) Gene Ontology  (7, 7)

Asymmetric/Biological Unit(hide GO term definitions)

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        Q4Q5S8_LEIMA | Q4Q5S8: 2wsa 3h5z 4a2z 4a30 4a31 4a32 4a33 4c7h 4c7i 4cgl 4cgm 4cgn 4cgo 4cgp 4cyn 4cyo 4cyp 4cyq 4ucm 4ucn 5a27 5a28 5ag4 5ag5 5ag6 5ag7 5age 5g20 5g21

(-) Related Entries Specified in the PDB File

4ucm CRYSTAL STRUCTURE OF LEISHMANIA MAJOR N- MYRISTOYLTRANSFERASE (NMT) WITH BOUND MYRISTOYL-COA AND A FRAGMENT
4ucn CRYSTAL STRUCTURE OF LEISHMANIA MAJOR N- MYRISTOYLTRANSFERASE (NMT) WITH BOUND MYRISTOYL-COA AND A FRAGMENT