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(-) Description

Title :  CRYSTAL STRUCTURE OF M TUBERCULOSIS ADENOSINE KINASE COMPLEXED WITH 2-FLURO ADENOSINE
 
Authors :  M. C. M. Reddy, S. K. Palaninathan, N. D. Shetty, J. L. Owen, M. D. Watson, J. C. Sacchettini
Date :  12 Aug 14  (Deposition) - 24 Sep 14  (Release) - 24 Sep 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.93
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Adenosine Kinase, Complex, 2-Fluoroadenosine, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. C. M. Reddy, S. K. Palaninathan, N. D. Shetty, J. L. Owen, M. D. Watson J. C. Sacchettini
Crystal Structure Of M Tuberculosis Adenosine Kinase Complexed With 2-Fluro Adenosine
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ADENOSINE KINASE
    Chains: A
    EC Number: 2.7.1.20
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28-B
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: ADOK, CBHK, MB2225C
    Organism Scientific: MYCOBACTERIUM BOVIS
    Organism Taxid: 233413
    Strain: ATCC BAA-935 / AF2122/97
    Synonym: AK

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
12FA1Ligand/Ion2-(6-AMINO-2-FLUORO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
12FA2Ligand/Ion2-(6-AMINO-2-FLUORO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:8 , ASP A:12 , SER A:36 , GLY A:47 , GLY A:48 , VAL A:49 , ASN A:52 , PHE A:102 , PHE A:116 , MET A:121 , ALA A:146 , ASN A:147 , GLN A:172 , GLN A:173 , ASP A:257 , HOH A:598binding site for residue 2FA A 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4UBE)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1His A:0 -Met A:1
2Asp A:235 -Gly A:236

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4UBE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:331
                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeee...eeeeeee...hhhhhhhhhhhhhh.......eeeeeeehhhhhhhhhhhhh...eeee.ee..hhhhhhhhhhh..ee....ee......eeeeeee.....eeeeeehhhhhhhhhhhhhhhhhhhh...eeeee..hhhhhhhhhhhhhhhh..eeeehhhhh...hhhhhhh......eeeeehhhhhhhhhhhh.hhhhhhh....eeee.hhh.eeee.....eeee............hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ube A  -7 EDLYFQSHMTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGADFADYRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSAIGKPELVIIGANDPEAMFLHTEECRKLGLAFAADPSQQLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMAQIDLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVLESTGTQEWQWDYEAAASRLAGAYGEHAAAEIVAVL 323
                                     2        12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4UBE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4UBE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4UBE)

(-) Gene Ontology  (9, 9)

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(-) Related Entries Specified in the PDB File

2pkk 2PKK CONTAINS SAME PROTEIN COMPLEXES WITH 2-FLUOROADENOSONE IN L CONFORMATION