4U5M - JenaLib

Title :   STRUCTURE OF A LEFT-HANDED DNA G-QUADRUPLEX

Authors :   E. Schmitt, Y. Mechulam, A. T. Phan, H. Brahim, W. J. Chung, K. W. Lim

Date :   25 Jul 14 (Deposition) - 25 Feb 15 (Release) - 11 Mar 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.50

Chains :   Asym./Biol. Unit : A

Keywords :   Dna, Quadruplex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   W. J. Chung, B. Heddi, E. Schmitt, K. W. Lim, Y. Mechulam, A. T. Phan
Structure Of A Left-Handed Dna G-Quadruplex.
Proc. Natl. Acad. Sci. Usa V. 112 2729 2015
PubMed-ID: 25695967 | Reference-DOI: 10.1073/PNAS.1418718112

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 5)

Sites (5, 5)

Asymmetric Unit (5, 5)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	DG A:2 , DG A:3 , DG A:5 , DG A:6 , DG A:8 , DG A:9 , DG A:11 , DG A:12 , K A:102	binding site for residue K A 101
2	AC2	SOFTWARE	DG A:3 , DG A:6 , DG A:9 , DG A:12 , DG A:15 , DG A:18 , DG A:21 , DG A:24 , K A:101 , K A:103	binding site for residue K A 102
3	AC3	SOFTWARE	DG A:15 , DG A:17 , DG A:18 , DG A:20 , DG A:21 , DG A:23 , DG A:24 , DG A:26 , K A:102	binding site for residue K A 103
4	AC4	SOFTWARE	DT A:1 , DT A:7 , DG A:8 , DT A:13 , HOH A:225 , HOH A:227	binding site for residue K A 104
5	AC5	SOFTWARE	DG A:12 , HOH A:207 , HOH A:211 , HOH A:220 , HOH A:226 , HOH A:229	binding site for residue MG A 105

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

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Chain A from PDB  Type:DNA  Length:28
                                                           
                  4u5m A  1 TGGTGGTGGTGGTTGTGGTGGTGGTGTT 28
                                    10        20

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

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Pfam Domains (0, 0)

Gene Ontology (0, 0)

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