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(-) Description

Title :  CRYSTAL STRUCTURE OF ARABIDOPSIS IMPORTIN-ALPHA3 ARMADILLO REPEAT DOMAIN
 
Authors :  L. Wirthmueller, M. Banfield
Date :  04 Jun 14  (Deposition) - 08 Oct 14  (Release) - 14 Jan 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Armadillo Repeat (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Wirthmueller, C. Roth, G. Fabro, M. C. Caillaud, G. Rallapalli, S. Asai, J. Sklenar, A. M. Jones, M. Wiermer, J. D. Jones, M. J. Banfield
Probing Formation Of Cargo/Importin-Alpha Transport Complexes In Plant Cells Using A Pathogen Effector.
Plant J. V. 81 40 2015
PubMed-ID: 25284001  |  Reference-DOI: 10.1111/TPJ.12691

(-) Compounds

Molecule 1 - IMPORTIN SUBUNIT ALPHA
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: POPIN-F
    Expression System Strain: SOLUBL21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: ARMADILLO REPEAT DOMIAN
    Gene: MOS6, AT4G02150
    Organism Common: MOUSE-EAR CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4TNM)

(-) Sites  (0, 0)

(no "Site" information available for 4TNM)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4TNM)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Glu A:152 -Asn A:153
2Lys A:235 -Pro A:236

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4TNM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4TNM)

(-) Exons   (0, 0)

(no "Exon" information available for 4TNM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:407
                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhh......hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhh..hhhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.hhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4tnm A  78 PAMVAGIWSQLEATNLLRKLLSIEQNPPINEVVQSGVVPRVVKFLSRDDFPKLQFEAAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQAVWALGNVAGDSPKCRDLVLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKPPPAFEQTQPALPVLERLVQSMDEEVLTDACWALSYLSDNSNDKIQAVIEAGVVPRLIQLLGHSSPSVLIPALRTIGNIVTGDDLQTQMVLDQQALPCLLNLLKNNYKKSIKKEACWTISNITAQIQAVIDAGIIQSLVWVLQSAEFEVKKEAAWGISNATSGHDQIKFMVSQGCIKPLCDLLTCPDLKVVTVCLEALENILVVGEAEKNLGEDNLYAQMIDEAEGLEKIENLQSHDNNDIYDKAVKILETFWT 498
                                   |92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352      |366       376       386       396     ||408       418       428       438       448   ||  461       471       481       491       
                                  85|                                                                                                                                                                                                                                                                         359|                                   402|                                            452|                                          
                                   91                                                                                                                                                                                                                                                                          364                                    405                                             456
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4TNM)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4TNM)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4TNM)

(-) Gene Ontology  (13, 13)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Glu A:152 - Asn A:153   [ RasMol ]  
    Lys A:235 - Pro A:236   [ RasMol ]  
 

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 Related Entries

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