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(-) Description

Title :  THE CRYSTAL STRUCTURE OF PSBP FROM SPINACIA OLERACEA
 
Authors :  P. Cao, Y. Xie, M. Li, X. W. Pan, H. M. Zhang, X. L. Zhao, X. D. Su, T. Cheng, W
Date :  15 Nov 14  (Deposition) - 11 Mar 15  (Release) - 11 Mar 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A
Keywords :  Beta-Sandwich Folding, Membrane-Extrinsic Protein Of Photosystem Ii, Photosynthesis, Manganese-Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Cao, Y. Xie, M. Li, X. W. Pan, H. M. Zhang, X. L. Zhao, X. D. Su, T. Cheng, W. Chang
Crystal Structure Analysis Of Extrinsic Psbp Protein Of Photosystem Ii Reveals A Manganese-Induced Conformational Change
Mol Plant 2015
PubMed-ID: 25704164  |  Reference-DOI: 10.1016/J.MOLP.2015.01.002

(-) Compounds

Molecule 1 - OXYGEN-EVOLVING ENHANCER PROTEIN 2, CHLOROPLASTIC
    Chains: A
    Fragment: UNP RESIDUES 82-267
    Organism Common: SPINACH
    Organism Scientific: SPINACIA OLERACEA
    Organism Taxid: 3562
    Synonym: OEE2, 23 KDA SUBUNIT OF OXYGEN EVOLVING SYSTEM OF PHOTOSYSTEM II, 23 KDA THYLAKOID MEMBRANE PROTEIN, OEC 23 KDA SUBUNIT

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2MN2Ligand/IonMANGANESE (II) ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:79 , HIS A:144 , ASP A:165 , CL A:803BINDING SITE FOR RESIDUE MN A 801
2AC2SOFTWAREASP A:24 , ASP A:73 , ASP A:98 , HOH A:903BINDING SITE FOR RESIDUE MN A 802
3AC3SOFTWAREASP A:79 , HIS A:144 , ASP A:165 , MN A:801 , HOH A:966BINDING SITE FOR RESIDUE CL A 803

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RTI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4RTI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RTI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RTI)

(-) Exons   (0, 0)

(no "Exon" information available for 4RTI)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:175
                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee...eeeeee...ee........eeeeeee..eeeeeeeeeeee....hhhhhhhhhhhhhhhhhhh......ee........ee...eeeeeeee..ee..ee.eeeeeeee........eeeeeeeeee..eeeeeeeeeehhhhhhhhhhhhhhhhhhhee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rti A  12 PKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSNLSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFGKTDSEGGFDSGVVASANVLESSTPVVDGKQYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICKAQAGDKRWFKGAKKFVESATSSFSVA 186
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RTI)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RTI)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RTI)

(-) Gene Ontology  (10, 10)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PSBP_SPIOL | P12302: 2vu4 3jcu

(-) Related Entries Specified in the PDB File

4rth