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(-) Description

Title :  BACTERIAL VITAMIN C TRANSPORTER ULAA/SGAT IN C2 FORM
 
Authors :  J. W. Wang
Date :  29 Oct 14  (Deposition) - 04 Mar 15  (Release) - 11 Mar 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.65
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Pts, Vitamin C Transporter, L-Ascorbate, L-Ascorbate-6-P, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Luo, X. Yu, W. Wang, S. Fan, X. Li, J. Wang
Crystal Structure Of A Phosphorylation-Coupled Vitamin C Transporter
Nat. Struct. Mol. Biol. 2015
PubMed-ID: 25686089  |  Reference-DOI: 10.1038/NSMB.2975

(-) Compounds

Molecule 1 - ASCORBATE-SPECIFIC PERMEASE IIC COMPONENT ULAA
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: ULAA, SGAT, YJFS, B4193, JW5744
    Organism Scientific: ESCHERICHIA COLI K-12
    Organism Taxid: 83333
    Strain: K12
    Synonym: ASCORBATE-SPECIFIC PTS SYSTEM EIIC COMPONENT

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 8)

Asymmetric Unit (4, 8)
No.NameCountTypeFull Name
11PE3Ligand/IonPENTAETHYLENE GLYCOL
2ASC1Ligand/IonASCORBIC ACID
3BNG3Ligand/IonB-NONYLGLUCOSIDE
4TGL1Ligand/IonTRISTEAROYLGLYCEROL
Biological Unit 1 (4, 16)
No.NameCountTypeFull Name
11PE6Ligand/IonPENTAETHYLENE GLYCOL
2ASC2Ligand/IonASCORBIC ACID
3BNG6Ligand/IonB-NONYLGLUCOSIDE
4TGL2Ligand/IonTRISTEAROYLGLYCEROL

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:86 , TYR A:87 , HIS A:135 , ILE A:136 , GLN A:139 , HIS A:194 , GLN A:195 , ASP A:314 , PHE A:362 , MET A:410 , HOH A:623 , HOH A:728BINDING SITE FOR RESIDUE ASC A 501
2AC2SOFTWAREASN A:13 , TYR A:101 , SER A:102 , VAL A:104 , GLY A:105 , TYR A:106 , LEU A:109 , PHE A:138BINDING SITE FOR RESIDUE BNG A 502
3AC3SOFTWAREVAL A:217 , GLU A:218 , ASP A:219 , LEU A:220 , LYS A:221 , PHE A:229 , HIS A:230 , ASN A:232 , ASN A:324 , VAL A:327 , HOH A:603 , HOH A:628 , HOH A:705 , HOH A:724 , HOH A:892BINDING SITE FOR RESIDUE BNG A 503
4AC4SOFTWAREASN A:18 , PRO A:20 , ILE A:49 , MET A:53 , GLN A:56 , GLN A:271 , SER A:275 , HOH A:644 , HOH A:700BINDING SITE FOR RESIDUE BNG A 504
5AC5SOFTWARELEU A:165 , TYR A:169 , THR A:173 , MET A:176 , TRP A:201 , TRP A:413 , ALA A:417 , MET A:420 , ILE A:435 , TYR A:442 , PHE A:445 , 1PE A:508 , HOH A:656 , HOH A:822 , HOH A:957BINDING SITE FOR RESIDUE TGL A 505
6AC6SOFTWARESER A:74 , TYR A:77 , GLY A:78 , ILE A:79 , ASN A:80 , VAL A:341 , VAL A:345 , LEU A:352 , HOH A:756BINDING SITE FOR RESIDUE 1PE A 506
7AC7SOFTWAREGLU A:75 , VAL A:76 , TYR A:77 , LYS A:212 , GLU A:214 , GLU A:215 , PHE A:251 , THR A:255 , HOH A:802 , HOH A:913BINDING SITE FOR RESIDUE 1PE A 507
8AC8SOFTWAREPHE A:393 , SER A:414 , ILE A:415 , TGL A:505 , HOH A:929BINDING SITE FOR RESIDUE 1PE A 508

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RP9)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4RP9)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RP9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RP9)

(-) Exons   (0, 0)

(no "Exon" information available for 4RP9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:451
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh..hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeehhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....ee...hhhhhhhhhhhhhhh.hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rp9 A   6 NIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDA 456
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RP9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RP9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RP9)

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)

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  4rp9
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ULAA_ECOLI | P39301: 4rp8

(-) Related Entries Specified in the PDB File

4rp8