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(-) Description

Title :  CRYSTAL STRUCTURE OF THE L27 DOMAIN OF DISCS LARGE 1 (TARGET ID NYSGRC-010766) FROM DROSOPHILA MELANOGASTER BOUND TO A POTASSIUM ION (SPACE GROUP P212121)
 
Authors :  A. Ghosh, U. Ramagopal, S. C. Almo, New York Structural Genomics Re Consortium (Nysgrc)
Date :  29 Oct 14  (Deposition) - 26 Nov 14  (Release) - 26 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.36
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Nysgrc, Structural Genomics, Psi-Biology, New York Structural Genomics Research Consortium, Scaffolding, Antitumor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Ghosh, U. Ramagopal, A. Ahmed, R. Bhoshle, R. Seidel, M. Stead, R. Toro, S. C. Almo
Crystal Structure Of The L27 Domain Of Discs Large 1 (Targe Id Nysgrc-010766) From Drosophila Melanogaster Bound To A Potassium Ion (Space Group P212121)
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - DISKS LARGE 1 TUMOR SUPPRESSOR PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PSGC-HIS
    Expression System Strain: BL21 (DE3) PRIL
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: L27 DOMAIN RESIDUES 1-97
    Gene: CG1725, DISCS LARGE 1 ISOFORM B, DLG1, L(1)DLG1
    Organism Common: FRUIT FLY
    Organism Scientific: DROSOPHILA MELANOGASTER
    Organism Taxid: 7227

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2FMT2Ligand/IonFORMIC ACID
3K1Ligand/IonPOTASSIUM ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECL A:103 , HOH A:269BINDING SITE FOR RESIDUE K A 101
2AC2SOFTWAREGLU A:24BINDING SITE FOR RESIDUE FMT A 102
3AC3SOFTWAREARG A:44 , K A:101BINDING SITE FOR RESIDUE CL A 103
4AC4SOFTWAREGLU A:16 , LYS A:42 , LYS A:83 , HOH A:208 , ASP B:92BINDING SITE FOR RESIDUE FMT B 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RP3)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4RP3)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RP3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RP3)

(-) Exons   (0, 0)

(no "Exon" information available for 4RP3)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:91
                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh..eeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------- Transcript
                  4rp3 A  5 KQEAHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALLDIQEFYELTLLDDSKSIQQKTAETLQIATKWEKDGQAVKIADFIK 95
                                    14        24        34        44        54        64        74        84        94 


Chain B from PDB  Type:PROTEIN  Length:90
                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhheeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                  4rp3 B  6 QEAHRALELLEDYHARLSEPQDRALRIAIERVIRIFKSRLFQALLDIQEFYELTLLDDSKSIQQKTAETLQIATKWEKDGQAVKIADFIK 95
                                    15        25        35        45        55        65        75        85        95
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RP3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RP3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RP3)

(-) Gene Ontology  (79, 79)

Asymmetric/Biological Unit(hide GO term definitions)

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  4rp3
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 Related Entries

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UniProtKB/Swiss-Prot
        DLG1_DROME | P31007: 3tvt 4rp4 4rp5

(-) Related Entries Specified in the PDB File

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