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(-) Description

Title :  CRYSTAL STRUCTURE OF KERATIN 4 BINDING DOMAIN OF SURFACE ADHESIN SRR-1 OF S.AGALACTIAE
 
Authors :  K. Ponnuraj, R. Sundaresan
Date :  21 Oct 14  (Deposition) - 11 Feb 15  (Release) - 11 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Variant Of Dev-Igg Fold, Adhesin, Keratin 4, Bacterial Cell Surface, Beta Sheet Complementation, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Sundaresan, U. Samen, K. Ponnuraj
Structure Of Krt4 Binding Domain Of Srr-1 From Streptococcu Agalactiae Reveals A Novel Beta-Sheet Complementation.
Int. J. Biol. Macromol. V. 75C 97 2015
PubMed-ID: 25603146  |  Reference-DOI: 10.1016/J.IJBIOMAC.2014.12.048

(-) Compounds

Molecule 1 - SERINE RICH REPEAT PROTEIN-1 (SRR-1)
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: KERATIN 4 BINDING DOMAIN
    Gene: GBS1529
    Organism Scientific: STREPTOCOCCUS AGALACTIAE NEM316
    Organism Taxid: 211110
    Strain: NEM316

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4RMB)

(-) Sites  (0, 0)

(no "Site" information available for 4RMB)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RMB)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4RMB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RMB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RMB)

(-) Exons   (0, 0)

(no "Exon" information available for 4RMB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:141
                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee......ee........eeeee...........eeeeeeee.hhh........eehhhhhh.ee...eeeee....ee...eeeeeeeeee...eeeeeeee......eeeeeeeeeeee......eeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rmb A 494 QTETYITQINPEGKEMYFASGLGNLYTIIGSDGSPVNLLNAEVKILKTNSKNLTNYDSPEFEDVTSQYSYTNDGSKITIDWKTNSISSTTSYVVLVKIPKQSGVLYSTVSDINQTYGSKYSYGHTNISGDSDANAEIKLLS 642
                                   503       513       523  ||   536       546   ||  561       571       581       591       601       611       621       631       641 
                                                          526|                 550|                                                                                      
                                                           530                  556                                                                                      


Chain B from PDB  Type:PROTEIN  Length:155
                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee......ee........eeeeee..........eeeeeeehhhhh.............eehhhhhh.ee...eeeee....ee....eeeeeeeee...eeeeeeee......eeeeeeeeee.....hhhhhh..eeeee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rmb B 493 RQTETYITQINPEGKEMYFASGLGNLYTIIGSDGSPVNLLNAEVKILKTNSKNLTDSMDQNYDSPEFEDVTSQYSYTNDGSKITIDWKTNSISSTTSYVVLVKIPKQSGVLYSTVSDINQTYGSKYSYGHTNISGDSDANAEIKLLSLEHHHHHH 650
                                   502       512       522   ||  535       545       555       565       575       585       595       605       615       625       635       645     
                                                           526|                                                                                                                        
                                                            530
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RMB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RMB)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (6, 6)

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 Related Entries

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UniProtKB/TrEMBL
        Q8E473_STRA3 | Q8E473: 4mbo

(-) Related Entries Specified in the PDB File

4mbo CRYSTAL STRUCTURE OF FIBRINOGEN BINDING REGION OF SRR-1 OF S. AGALACTIAE