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(-) Description

Title :  CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (BPSL2088) FROM BURKHOLDERIA PSEUDOMALLEI K96243 AT 2.25 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  02 Oct 14  (Deposition) - 10 Dec 14  (Release) - 10 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.25
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  New Fold, Six Stranded Anit-Parallel Sheet Surrounded By Alpha- Helices, Imm32 Pfam Family, Pf15579, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-Biology, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of A Hypothetical Protein (Bpsl2088) From Burkholderia Pseudomallei K96243 At 2. 25 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: BPSL2088
    Organism Scientific: BURKHOLDERIA PSEUDOMALLEI K96243
    Organism Taxid: 272560
    Strain: K96243

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 14)

Asymmetric Unit (2, 14)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE
2PGE2Ligand/IonTRIETHYLENE GLYCOL
Biological Unit 1 (2, 7)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
2PGE1Ligand/IonTRIETHYLENE GLYCOL
Biological Unit 2 (2, 7)
No.NameCountTypeFull Name
1MSE6Mod. Amino AcidSELENOMETHIONINE
2PGE1Ligand/IonTRIETHYLENE GLYCOL

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREMSE A:1 , GLY A:121 , PRO A:123BINDING SITE FOR RESIDUE PGE A 301
2AC2SOFTWAREGLY B:121 , PRO B:123 , ASP B:131BINDING SITE FOR RESIDUE PGE B 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RHO)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4RHO)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RHO)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4RHO)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:256
                                                                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhh....eeeeeee........hhhhhhhhhhhhhhhhhh.hhhhhhhhhee....................hhhhhhhhhhhhh.......eeeee..........eeeee........eeeeeeee......hhhhhhhhhhhhhhhhh..eeeeee.................eeee.............eeeeeee..eeeeeeee..........hhhhhhhhhhhhhhhhhh....hhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rho A -15 DKIHHHHHHENLYFQGmEIKAmFRDVSLSSRNFSEmLSRESKVVAALAAKSPLmAHANWRLKGNSLEEATLYPAFDADGSPSTPALAVLNEEQRGKKHSASHAAIWNGNTRPNEGASmSCHVSDEKVLPDRFSTRLGVPDCYAKSQDLADVVTTIVAAFNPLVVEASPEGYFDKQVFDDKPGVGWmLYLPKVITQQQVPEARALIPVSAKGKQTGTIIVSVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVDI 240
                                    -6      |  4 |      14     |  24        34   |    44        54        64        74        84        94       104       114       124       134       144       154       164     | 174       184       194       204       214       224       234      
                                            1-MSE|            20-MSE            38-MSE                                                         102-MSE                                                             170-MSE                                                                  
                                                 6-MSE                                                                                                                                                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:257
                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhh....eeeeeee........hhhhhhhhhhhhhhhhhh.hhhhhhhhhee....................hhhhhhhhhhhhh.......eeeee..........eeeee........eeeeeeee......hhhhhhhhhhhhhhhhh..eeeeee.................eeee.............eeeeeee..eeeeeeee..........hhhhhhhhhhhhhhhhhh....hhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rho B -16 SDKIHHHHHHENLYFQGmEIKAmFRDVSLSSRNFSEmLSRESKVVAALAAKSPLmAHANWRLKGNSLEEATLYPAFDADGSPSTPALAVLNEEQRGKKHSASHAAIWNGNTRPNEGASmSCHVSDEKVLPDRFSTRLGVPDCYAKSQDLADVVTTIVAAFNPLVVEASPEGYFDKQVFDDKPGVGWmLYLPKVITQQQVPEARALIPVSAKGKQTGTIIVSVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVDI 240
                                    -7       | 3  |     13      | 23        33    |   43        53        63        73        83        93       103       113       123       133       143       153       163      |173       183       193       203       213       223       233       
                                             1-MSE|            20-MSE            38-MSE                                                         102-MSE                                                             170-MSE                                                                  
                                                  6-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RHO)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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