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(-) Description

Title :  STRUCTURE AND FUNCTION OF A SINGLE-CHAIN, MULTI-DOMAIN LONG-CHAIN ACYL-COA CARBOXYLASE
 
Authors :  T. H. Tran, L. Tong
Date :  16 Sep 14  (Deposition) - 05 Nov 14  (Release) - 11 Mar 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.01
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (3x)
Keywords :  Holoenzyme, Acyl-Coa Carboxylase, Protein Structure, Alpha/Beta, Carboxylase, Coa Binding, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. H. Tran, Y. S. Hsiao, J. Jo, C. Y. Chou, L. E. Dietrich, T. Walz, L. Tong
Structure And Function Of A Single-Chain, Multi-Domain Long-Chain Acyl-Coa Carboxylase.
Nature V. 518 120 2015
PubMed-ID: 25383525  |  Reference-DOI: 10.1038/NATURE13912

(-) Compounds

Molecule 1 - LONG-CHAIN ACYL-COA CARBOXYLASE
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: MAP_2873C
    Organism Scientific: MYCOBACTERIUM AVIUM SUBSP. PARATUBERCULOSIS
    Organism Taxid: 262316
    Strain: STRAIN ATCC BAA-968 / K-10

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (3x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4RCN)

(-) Sites  (0, 0)

(no "Site" information available for 4RCN)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RCN)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Ala A:243 -Pro A:244
2Ala B:243 -Pro B:244

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RCN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RCN)

(-) Exons   (0, 0)

(no "Exon" information available for 4RCN)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:972
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee..hhhhhhhhhhhhhhhh.eeeeeee.....hhhhhhh.eeeee...hhhhhhhhhhhhhhhhhh...eee........hhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhh............eeeeeeeeeeee..eeeeeeeeeee...ee..ee.eeee.....hhhhhhhhhhhhhhhhhhh...eeeeeeeeee..eeeeeeee.....hhhhhhhhhh.hhhhhhhhhhh..hhhhhh.....ee....ee........eeeeeeee.eee.....eee..ee..eee......eeeee......ee......eeeeeeeee...hhhhhhhhhhhhhhh.eee....hhhhhhhhh..hhhhhh....hhhhhhhhhhhh............eeee....eeeeee.....ee....eeeeee....eeeee....eeeeee......ee....eeeeeee......hhhhhhhhhhhhh.....hhhhhhhhhhh...hhhhhhhhhh.....eee............hhhhhhhhhhhh.eeeeeee...........eeeeeee...hhhhh.hhhhhhhhhhhhhhhhhh...eeee................hhhhhhhh......eeeee..eeehhhhhhhh...eeee....eee..hhhhhhhh.....hhhhh...hhhhhh....ee..hhhhhhhhhhhhhhhh..........hhhhhhh..........hhhhhhhhhh.....eee.......eeeeeeee..eeeeeeee.........hhhhhhhhhhhhhhhhhh...eeeeeee.....hhhhhhhhhhhhhhhhhhhhhh....eeeeeeeeeehhhhhhh.........eeee....eee..hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhh....ee.hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4rcn A    3 ASLLVANRGEIALRIIRTATELGMRTVAVYAADDAHSPHVHAADEAMPLPGSGPPAYLNQAALLAVAENTGATLIHPGYGFLSENAEFAKACAAASHTFVGPDGRVLELLGNKTAARRAAIAAGVPTLAALLGDARHIEVQVVAAPAGHQTHALAVGDRDCSMQRRYQKLIEIAPAQGLSEELRRALHQAAVRLCARVGLRGLATVEFLVSGERFVFLEVNPRIQVEHTVTEQTTGLDLVAVQLAIAGGESYYRLGLPAGIASDGTEVIGEPAAQRGIAIQLRVNAETFGADFSVLPSAGTLTAFCPPSGPGVRVDTYGRPGLVVSPQYDSLLAKVIVAVHGSSWRAAMRKADTALSEFGVEGVATNIGFLRRLLAEQRLETGWVNTDFVDEKLPELAAAAPGAVELYPGEDALRAQLAGTVVEVAPEGADYPAGAQLVVLEAMKMQHVLAAPDALRTVRVLVTPGQVVGTGDPLLVFTRTDLDLTRADLDEVIERHARTLDEGRPDAVAKRHRQGRRTARENIDDLVDPGSFVEYGALAIAAQRSRRSEEDLIANTPADGLVAGLATVGADRFGPAAAQAVVASYDYTVLAGTQGMRNHAKTDRVFDLAARKRLPVVLFAEGGRPGDTGAAGLDVPTFRMLAGLRGRVPLVSVVSGRCFAGNAALAGVCDVIIATPDANIGMGGPAMIEGGGLGVYPPEAIGPIAVQRRNGVVGLVARDEAHAVSLAKQYLSYFQGRLDRWQAPDPRVARHVVPQNRLRAYDVHRAIEAIVDVGSVLELRPDYGVGIVTALVRVEGVPYGLIANSTHHLGGAIDAEAADKAGDFLALCESFGLPVISLCDTPGFMVGPDAETQAAVRRFGRMFVLGARLTVPLGMIILRKGYGLGAMAMAGGSFRAPQFTVAWPTGEIGGMGLESAVRLGYRTDPAERQNLFDRLVAAAYQHGKALRAATTFELDDVIDPAASRAWITRLS 1073
                                    12        22        32        42        52        62        72        82        92       102       112       122       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469||     487       497       507       517       527       537       547       557||     580       590       600       610       620       630       640       650       660       670       680       690       700       710   ||  725       735       745       755       765       775       785       795       805       815       825       835       845       855       865       875       885       895       905       915       925       935       945       955       965       975       985       995      1005      1015  ||  1031      1041      1051      1061      1071  
                                                                                                                                                          131|                                                                                                                                                                                                                                                                            470|                                                                            558|                                                                                                                                           714| 721|                                                                                                                                                                                                                                                                                                 1018|                                                
                                                                                                                                                           199                                                                                                                                                                                                                                                                             479                                                                             572                                                                                                                                            717  725                                                                                                                                                                                                                                                                                                  1025                                                


Chain B from PDB  Type:PROTEIN  Length:1000
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..hhhhhhhhhhhhhhh..eeeeeee.....hhhhhh..eeeee...hhhhhhhhhhhhhhhhh....eee........hhhhhhhhhhh..ee...hhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhh.eee...eee....ee.....eeeeeeeeeee....eeeeeeeeee...ee..ee.eeee.....hhhhhhhhhhhhhhhhhhh...eeeeeeeee......eeeee.....hhhhhhhhhh.hhhhhhhhhhh..hhhhh.....eee....ee........eeeeeeee.eee.....eee..ee..eee......eeeee......ee......eeeeeeeee...hhhhhhhhhhhhhhhheee....hhhhhhhhhh.hhhhhh....hhhhhhhhhhhhh........eeee....eeeeee.....ee....eeeee......eeee....eeeeee......ee....eeeeeee..hhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhhhhhhh.....eee............hhhhhhhhhhhh.eeeeeee...........eeeeeee...hhhhh.hhhhhhhhhhhhhhhhhh...eeeeeee...............hhhhhhhh......eeeeeeeeeehhhhhhhh...eeee....eee..hhhhhhhh.....hhhhh.hhhhhh......ee..hhhhhhhhhhhhhhh...........hhhhhhh..........hhhhhhhh.......eee.......eeeeeeee..eeeeeeee.........hhhhhhhhhhhhhhhhhh...eeeeeee.....hhhhhhhhhhhhhhhhhhhhh.....eeeeeeeeeehhhhhhh.........eeee....eee..hhhhhhhhhh......hhhhhhhhhhhhhh..hhhhhhhh....ee.hhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4rcn B    1 MTASLLVANRGEIALRIIRTATELGMRTVAVYAADDAHSPHVHAADEAMPLPGSGPPAYLNQAALLAVAENTGATLIHPGYGFLSENAEFAKACAAASHTFVGPDGRVLELLGNKTAARRAAIAAGVPTLAATDGPSGVEDIEAFFAGIMIKGMRKVHLFAEALLGDARHIEVQVVAAPAGHQTHALAVGDRDCSMQRRYQKLIEIAPAQGLSEELRRALHQAAVRLCARVGLRGLATVEFLVSGERFVFLEVNPRIQVEHTVTEQTTGLDLVAVQLAIAGGESYYRLGLPAGIASDGTEVIGEPAAQRGIAIQLRVNAETFGADFSVLPSAGTLTAFCPPSGPGVRVDTYGRPGLVVSPQYDSLLAKVIVAVHGSSWRAAMRKADTALSEFGVEGVATNIGFLRRLLAEQRLETGWVNTDFVDEKLPELAAAAVELYPGEDALRAQLAGTVVEVAPEGADYPAGAQLVVLEAMKMQHVLAAPDALRTVRVLVTPGQVVGTGDPLLVFTRTTRADLDEVIERHARTLDEGRPDAVAKRHRQGRRTARENIDDLVDPGSFVEYGALAIAAQRSRRSEEDLIANTPADGLVAGLATVGADRFGPAAAQAVVASYDYTVLAGTQGMRNHAKTDRVFDLAARKRLPVVLFAEGGGGRPGDTGAAGLDVPTFRMLAGLRGRVPLVSVVSGRCFAGNAALAGVCDVIIATPDANIGMGGPAMIEGGGLGVYPPEAIGPIAVQRRNGVVGLVARDEAHAVSLAKQYLSYFQGRLDRWQAPDPRVARHVVPQNRLRAYDVHRAIEAIVDVGSVLELRPDYGVGIVTALVRVEGVPYGLIANSTHHLGGAIDAEAADKAGDFLALCESFGLPVISLCDTPGFMVGPDAETQAAVRRFGRMFVLGARLTVPLGMIILRKGYGLGAMAMAGGSFRAPQFTVAWPTGEIGGMGLESAVRLGYRTDPAERQNLFDRLVAAAYQHGKALRAATTFELDDVIDPAASRAWITRLS 1073
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140      |154 ||    196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466   ||  487       497       507       517       527       537       547       557||     584       594       604       614       624       634       644       654       664       674       684       694       704       714      |727       737       747       757       767       777       787       797       807       817       827       837       847       857       867       877       887       897       907       917       927       937       947       957       967       977       987       997      1007      1017||    1033      1043      1053      1063      1073
                                                                                                                                                                            147| 156|  170|                                                                                                                                                                                                                                                                                470|                                                                         558|                                                                                                                                              721|                                                                                                                                                                                                                                                                                                 1018|                                                
                                                                                                                                                                             152  165   195                                                                                                                                                                                                                                                                                 482                                                                          576                                                                                                                                               725                                                                                                                                                                                                                                                                                                  1025
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RCN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RCN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RCN)

(-) Gene Ontology  (5, 5)

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  Cis Peptide Bonds
    Ala A:243 - Pro A:244   [ RasMol ]  
    Ala B:243 - Pro B:244   [ RasMol ]  
 
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