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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN PROTEIN KINASE C ALPHA IN COMPLEX WITH COMPOUND 28 ((R)-6-((3S,4S)-1,3-DIMETHYL-PIPERIDIN-4-YL)-7-(2-FLUORO-PHENYL)-4-METHYL-2,10-DIHYDRO-9-OXA-1,2,4A-TRIAZA-PHENANTHREN-3-ONE)
 
Authors :  M. A. Argiriadi, D. M. George
Date :  09 Sep 14  (Deposition) - 08 Oct 14  (Release) - 04 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.63
Chains :  Asym./Biol. Unit :  A
Keywords :  Kinase Domain, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. M. George, E. C. Breinlinger, M. A. Argiriadi, Y. Zhang, J. Wang, P. Bansal-Pakala, D. B. Duignan, P. Honore, Q. Lang, S. Mittelstadt, L. Rundell, A. Schwartz, J. Sun, J. J. Edmunds
Optimized Protein Kinase C Theta (Pkc Theta ) Inhibitors Reveal Only Modest Anti-Inflammatory Efficacy In A Rodent Model Of Arthritis.
J. Med. Chem. V. 58 333 2015
PubMed-ID: 25254961  |  Reference-DOI: 10.1021/JM5013006

(-) Compounds

Molecule 1 - PROTEIN KINASE C
    Chains: A
    EC Number: 2.7.11.13
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Taxid: 7108
    Fragment: KINASE DOMAIN
    Gene: PRKCA
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
13KZ1Ligand/Ion(1R)-9-[(3S,4S)-1,3-DIMETHYLPIPERIDIN-4-YL]-8-(2-FLUOROPHENYL)-1-METHYL-3,5-DIHYDRO[1,2,4]TRIAZINO[3,4-C][1,4]BENZOXAZIN-2(1H)-ONE
2SEP1Mod. Amino AcidPHOSPHOSERINE
3TPO2Mod. Amino AcidPHOSPHOTHREONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:346 , PHE A:350 , VAL A:353 , ALA A:366 , THR A:401 , MET A:417 , GLU A:418 , VAL A:420 , ASP A:467 , ASN A:468 , ASP A:481BINDING SITE FOR RESIDUE 3KZ A 701

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RA4)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4RA4)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RA4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RA4)

(-) Exons   (0, 0)

(no "Exon" information available for 4RA4)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:320
                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhh.eeeeeeeee....eeeeeee.....eeeeeeeehhhhhhh.hhhhhhhhhhhhhh.........eeeeee...eeeeee......hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee.....................hhhhhhhhhhh.....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.....hhhhhhhhhhhhh..hhhhhhh..................hhhhhhh.hhhhhh...ee....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ra4 A 332 DRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTRtFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKGQPVLtPPDQLVIANIDQSDFEGFsYVNPQFVHP 666
                                   341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491     | 501       511       521       531       541       551       561       571       581       591       601       611     ||636 |     646       656|      666
                                                                                                                                                                                               497-TPO                                                                                                                 617|    |                657-SEP     
                                                                                                                                                                                                                                                                                                                        633    |                            
                                                                                                                                                                                                                                                                                                                             638-TPO
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RA4)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RA4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RA4)

(-) Gene Ontology  (55, 69)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        KPCA_HUMAN | P17252: 2eli 3iw4 4dnl

(-) Related Entries Specified in the PDB File

4q9s 4q9z