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(-) Description

Title :  CRYSTAL STRUCTURE OF PETUNIA HYDRIDA CINNAMOYL-COA REDUCTASE
 
Authors :  J. P. Noel, G. V. Louie, M. E. Bowman, E. K. Bomati
Date :  07 Aug 14  (Deposition) - 01 Oct 14  (Release) - 12 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Cinnamoyl-Coa Reductase, Short-Chain Dehydrogenase/Reductase, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Pan, R. Zhou, G. V. Louie, J. K. Muhlemann, E. K. Bomati, M. E. Bowman, N. Dudareva, R. A. Dixon, J. P. Noel, X. Wang
Structural Studies Of Cinnamoyl-Coa Reductase And Cinnamyl-Alcohol Dehydrogenase, Key Enzymes Of Monolignol Biosynthesis.
Plant Cell V. 26 3709 2014
PubMed-ID: 25217505  |  Reference-DOI: 10.1105/TPC.114.127399

(-) Compounds

Molecule 1 - CINNAMOYL COA REDUCTASE
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PHIS8
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: PHCCR1
    Organism Common: GARDEN PETUNIA
    Organism Scientific: PETUNIA X HYBRIDA
    Organism Taxid: 4102

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1NAP2Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1NAP1Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1NAP1Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:16 , PHE A:17 , ILE A:18 , ARG A:38 , LYS A:44 , ASP A:64 , LEU A:65 , THR A:84 , ALA A:85 , SER A:86 , PRO A:87 , THR A:121 , SER A:122 , TYR A:157 , LYS A:161 , PRO A:184 , VAL A:185 , LEU A:186 , VAL A:187 , ASN A:197 , SER A:199 , HOH A:501 , HOH A:504 , HOH A:505 , HOH A:507 , HOH A:508 , HOH A:510 , HOH A:529 , HOH A:538 , HOH A:572 , HOH A:579 , HOH A:581 , HOH A:615 , HOH A:630 , HOH A:655 , HOH A:692 , HOH A:706BINDING SITE FOR RESIDUE NAP A 401
2AC2SOFTWAREGLY B:16 , PHE B:17 , ILE B:18 , ARG B:38 , LYS B:44 , ASP B:64 , LEU B:65 , THR B:84 , ALA B:85 , SER B:86 , PRO B:87 , THR B:121 , SER B:122 , TYR B:157 , LYS B:161 , PRO B:184 , VAL B:185 , VAL B:187 , SER B:199 , HOH B:502 , HOH B:503 , HOH B:504 , HOH B:507 , HOH B:508 , HOH B:512 , HOH B:526 , HOH B:547 , HOH B:564 , HOH B:570 , HOH B:600 , HOH B:606 , HOH B:608 , HOH B:644 , HOH B:685BINDING SITE FOR RESIDUE NAP B 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4R1S)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4R1S)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4R1S)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4R1S)

(-) Exons   (0, 0)

(no "Exon" information available for 4R1S)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:319
                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee...hhhhhhhhhhhhhh..eeeeee....hhhhhhhhh..hhhhheeeee....hhhhhhhhhh...eeee.......hhhhhhhhhhhhhhhhhhhhhhh...eeeee.hhhhh..................hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..eeeeee.eee........hhhhhhhhhhhh.........eeeeeehhhhhhhhhhhhhh....eeeee..eeeehhhhhhhhhhhh.......................hhhhhhh.....hhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4r1s A   4 VSGQVVCVTGAGGFIASWLVKILLEKGYTVRGTVRNPDDPKNGHLRELEGAKERLTLCKADLLDYQSLREAINGCDGVFHTASPVTDDPEQMVEPAVIGTKNVINAAAEANVRRVVFTSSIGAVYMDPNRDPETVVDETCWSDPDFCKNTKNWYCYGKMVAEQAAWEEAKEKGVDLVVINPVLVQGPLLQTTVNASVLHILKYLTGSAKTYANSVQAYVDVKDVALAHILLYETPEASGRYLCAESVLHRGDVVEILSKFFPEYPIPTKCSDVTKPRVKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIPT 322
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313         


Chain B from PDB  Type:PROTEIN  Length:318
                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeee....hhhhhhhhhhhhhh..eeeeee....hhhhhhhhh..hhhhheeeee....hhhhhhhhhh...eeee.......hhhhhhhhhhhhhhhhhhhhhhh...eeeee.hhhhh..................hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..eeeeee.eee........hhhhhhhhhhhh.........eeeeeehhhhhhhhhhhhhh....eeeee..eeeehhhhhhhhhhhh.......................hhhhhhh.....hhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4r1s B   4 VSGQVVCVTGAGGFIASWLVKILLEKGYTVRGTVRNPDDPKNGHLRELEGAKERLTLCKADLLDYQSLREAINGCDGVFHTASPVTDDPEQMVEPAVIGTKNVINAAAEANVRRVVFTSSIGAVYMDPNRDPETVVDETCWSDPDFCKNTKNWYCYGKMVAEQAAWEEAKEKGVDLVVINPVLVQGPLLQTTVNASVLHILKYLTGSAKTYANSVQAYVDVKDVALAHILLYETPEASGRYLCAESVLHRGDVVEILSKFFPEYPIPTKCSDVTKPRVKPYKFSNQKLKDLGLEFTPVKQCLYETVKSLQEKGHLPIP 321
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4R1S)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4R1S)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4R1S)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4R1S)

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        A0A059TC02_P | A0A059TC02: 4r1t

(-) Related Entries Specified in the PDB File

4r1t 4r1u