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(-) Description

Title :  CRYSTAL STRUCTURE OF AN N-TERMINAL HTATIP FRAGMENT
 
Authors :  Y. Liu, W. Tempel, A. K. Wernimont, E. Dobrovetsky, C. Bountra, C. H. Arr A. M. Edwards, J. Min, Structural Genomics Consortium (Sgc)
Date :  27 Jun 14  (Deposition) - 09 Jul 14  (Release) - 09 Jul 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D,E,F,G
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  G  (1x)
Keywords :  Structural Genomics Consortium, Sgc, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Liu, W. Tempel, A. K. Wernimont, E. Dobrovetsky, C. Bountra, C. H. Arrowsmith, A. M. Edwards, J. Min, Structural Genomics Consortium (Sgc)
Crystal Structure Of An N-Terminal Htatip Fragment
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HISTONE ACETYLTRANSFERASE KAT5
    Chains: A, B, C, D, E, F, G
    EC Number: 2.3.1.48
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28-MHL
    Expression System Strain: BL21(DE3)-V2R-PRARE2
    Expression System Taxid: 469008
    Fragment: UNP RESIDUES 1-80
    Gene: KAT5, HTATIP, TIP60
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: 60 KDA TAT-INTERACTIVE PROTEIN, TIP60, HISTONE ACETYLTRANSFERASE HTATIP, HIV-1 TAT INTERACTIVE PROTEIN, LYSINE ACETYLTRANSFERASE 5, CPLA(2)-INTERACTING PROTEIN

 Structural Features

(-) Chains, Units

  1234567
Asymmetric Unit : ABCDEFG
Biological Unit 1 (1x): A      
Biological Unit 2 (1x):  B     
Biological Unit 3 (1x):   C    
Biological Unit 4 (1x):    D   
Biological Unit 5 (1x):     E  
Biological Unit 6 (1x):      F 
Biological Unit 7 (1x):       G

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 13)

Asymmetric Unit (1, 13)
No.NameCountTypeFull Name
1UNX13Ligand/IonUNKNOWN ATOM OR ION
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1UNX4Ligand/IonUNKNOWN ATOM OR ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1UNX1Ligand/IonUNKNOWN ATOM OR ION
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1UNX-1Ligand/IonUNKNOWN ATOM OR ION
Biological Unit 4 (1, 2)
No.NameCountTypeFull Name
1UNX2Ligand/IonUNKNOWN ATOM OR ION
Biological Unit 5 (1, 1)
No.NameCountTypeFull Name
1UNX1Ligand/IonUNKNOWN ATOM OR ION
Biological Unit 6 (1, 2)
No.NameCountTypeFull Name
1UNX2Ligand/IonUNKNOWN ATOM OR ION
Biological Unit 7 (1, 3)
No.NameCountTypeFull Name
1UNX3Ligand/IonUNKNOWN ATOM OR ION

(-) Sites  (0, 0)

(no "Site" information available for 4QQG)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QQG)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4QQG)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QQG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QQG)

(-) Exons   (0, 0)

(no "Exon" information available for 4QQG)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:71
                                                                                                      
               SCOP domains ----------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhh....eee..ee.....ee..eeeeeeee......eeeeee...hhhhheeehhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------- Transcript
                  4qqg A  1 MAEVGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLDLKKIQFP 71
                                    10        20        30        40        50        60        70 


Chain B from PDB  Type:PROTEIN  Length:67
                                                                                                  
               SCOP domains ------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh....eee..........eeeeeeeeee..eeeeeeee...hhhhheeehhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                  4qqg B  3 EVGEIIEGCRLPVLRRNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLDLKKIQFPK 72
                                    12      ||25        35        45        55        65       
                                           19|                                                 
                                            23                                                 


Chain C from PDB  Type:PROTEIN  Length:70
                                                                                                     
               SCOP domains ---------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh....eee..ee....ee..eeeeeeee......eeeeee...hhhhheeehhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------- Transcript
                  4qqg C  2 AEVGEIIEGCRLPVLRRNDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLDLKKIQFPK 72
                                    11       |22        32        42        52        62        72
                                            19|                                                   
                                             21                                                   


Chain D from PDB  Type:PROTEIN  Length:69
                                                                                                    
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh....eee..ee.....ee..eeeeeeee......eeeeee...hhhhheeehhhhh........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  4qqg D  3 EVGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLDLKKIQFP 71
                                    12        22        32        42        52        62         


Chain E from PDB  Type:PROTEIN  Length:72
                                                                                                       
               SCOP domains ------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhh....eee..ee.....ee..eeeeeeee......eeeeee...hhhhheeehhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------ Transcript
                  4qqg E  1 MAEVGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLDLKKIQFPK 72
                                    10        20        30        40        50        60        70  


Chain F from PDB  Type:PROTEIN  Length:70
                                                                                                     
               SCOP domains ---------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh....eee.............eeeeeeee......eeeeee...hhhhheeehhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------- Transcript
                  4qqg F  3 EVGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLDLKKIQFPK 72
                                    12        22        32        42        52        62        72


Chain G from PDB  Type:PROTEIN  Length:73
                                                                                                        
               SCOP domains ------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhh....eee..ee.....ee..eeeeeeee......eeeeee...hhhhheeehhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
                  4qqg G  0 GMAEVGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLDLKKIQFPK 72
                                     9        19        29        39        49        59        69
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QQG)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QQG)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QQG)

(-) Gene Ontology  (43, 43)

Asymmetric Unit(hide GO term definitions)

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  4qqg
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  KAT5_HUMAN | Q92993
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 Related Entries

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        KAT5_HUMAN | Q92993: 2eko 2ou2

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