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(-) Description

Title :  CRYSTAL STRUCTURE OF THE TETRAMERIC DGTP/DCTP-BOUND SAMHD1 (RN206) MUTANT CATALYTIC CORE
 
Authors :  L. M. I. Koharudin, Y. Wu, M. Delucia, J. Mehrens, A. M. Gronenborn, J. Ah
Date :  22 May 14  (Deposition) - 15 Oct 14  (Release) - 03 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Deoxynucleoside Triphosphate Triphosphohydrolase, 2'-Deoxynucleotide- 5'-Triphosphate, Hiv Restriction Factor, Dntpase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. M. Koharudin, Y. Wu, M. Delucia, J. Mehrens, A. M. Gronenborn, J. Ahn
Structural Basis Of Allosteric Activation Of Sterile Alpha Motif And Histidine-Aspartate Domain-Containing Protein 1 (Samhd1) By Nucleoside Triphosphates.
J. Biol. Chem. V. 289 32617 2014
PubMed-ID: 25288794  |  Reference-DOI: 10.1074/JBC.M114.591958

(-) Compounds

Molecule 1 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1
    Chains: A, B, C, D
    EC Number: 3.1.5.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28B
    Expression System Strain: ROSETTA 2 (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 113-626
    Gene: SAMHD1, MOP5
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: DNTPASE, DENDRITIC CELL-DERIVED IFNG-INDUCED PROTEIN, DCIP, MONOCYTE PROTEIN 5, MOP-5, SAM DOMAIN AND HD DOMAIN-CONTAINING PROTEIN 1

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 20)

Asymmetric/Biological Unit (3, 20)
No.NameCountTypeFull Name
1DCP4Ligand/Ion2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
2DGT8Ligand/Ion2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
3MG8Ligand/IonMAGNESIUM ION

(-) Sites  (20, 20)

Asymmetric Unit (20, 20)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:155 , VAL A:156 , VAL A:378 , ARG A:451 , LYS A:455 , HOH A:834 , HOH A:867 , LYS C:523 , DGT C:701 , MG C:705 , HOH C:801 , LYS D:116 , VAL D:117 , ILE D:118 , ASP D:137 , GLN D:142 , ARG D:145 , PHE D:165BINDING SITE FOR RESIDUE DGT A 701
02AC2SOFTWAREGLN A:149 , LEU A:150 , ARG A:164 , ARG A:206 , HIS A:210 , HIS A:215 , HIS A:233 , LYS A:312 , TYR A:315 , ASP A:319 , ARG A:366 , TYR A:374 , GLN A:375 , MG A:705 , HOH A:805 , HOH A:821 , HOH A:825 , HOH A:869 , HOH A:870 , HOH A:873BINDING SITE FOR RESIDUE DCP A 702
03AC3SOFTWAREASP A:330 , ARG A:333 , PHE A:337 , ARG A:352 , LYS A:354 , ASN A:358 , LYS A:523 , HOH A:813 , HOH A:839 , VAL B:117 , ASN B:119 , MG B:703 , VAL C:156 , PHE C:157 , ILE C:325 , ARG C:372 , HIS C:376 , LYS C:377 , DGT C:703BINDING SITE FOR RESIDUE DGT A 703
04AC4SOFTWARELYS A:116 , VAL A:117 , ASP A:137 , GLN A:142 , ARG A:145 , PHE A:165 , MG A:706 , HOH A:803 , HOH A:809 , HOH A:838 , HOH A:847 , HOH A:854 , LYS B:523 , DGT B:702 , TYR D:155 , VAL D:156 , VAL D:378 , ARG D:451 , LYS D:455BINDING SITE FOR RESIDUE DGT A 704
05AC5SOFTWAREDCP A:702 , HOH A:804BINDING SITE FOR RESIDUE MG A 705
06AC6SOFTWAREDGT A:704 , DGT B:702BINDING SITE FOR RESIDUE MG A 706
07AC7SOFTWAREGLN B:149 , LEU B:150 , ARG B:164 , ARG B:206 , HIS B:210 , HIS B:215 , HIS B:233 , LYS B:312 , TYR B:315 , ASP B:319 , ARG B:366 , TYR B:374 , GLN B:375 , MG B:704 , HOH B:805 , HOH B:806 , HOH B:810 , HOH B:827 , HOH B:844 , HOH B:850 , HOH B:875 , HOH B:884 , HOH B:899BINDING SITE FOR RESIDUE DCP B 701
08AC8SOFTWAREVAL A:117 , ASN A:119 , HIS A:125 , DGT A:704 , MG A:706 , ASP B:330 , ARG B:333 , PHE B:337 , ARG B:352 , LYS B:354 , ASN B:358 , LYS B:523 , HOH B:830 , HOH B:840 , HOH B:853 , VAL D:156 , PHE D:157 , ARG D:372 , HIS D:376 , LYS D:377BINDING SITE FOR RESIDUE DGT B 702
09AC9SOFTWAREDGT A:703 , LYS B:116 , DGT C:703BINDING SITE FOR RESIDUE MG B 703
10BC1SOFTWAREDCP B:701 , HOH B:802 , HOH B:805 , HOH B:825BINDING SITE FOR RESIDUE MG B 704
11BC2SOFTWAREVAL A:156 , PHE A:157 , ILE A:325 , ARG A:372 , HIS A:376 , LYS A:377 , DGT A:701 , ASP C:330 , ARG C:333 , PHE C:337 , ARG C:352 , LYS C:354 , ASN C:358 , LYS C:523 , MG C:705 , HOH C:801 , HOH C:835 , HOH C:862 , HOH C:865 , VAL D:117 , ASN D:119 , HIS D:125BINDING SITE FOR RESIDUE DGT C 701
12BC3SOFTWARETYR B:155 , VAL B:156 , VAL B:378 , ARG B:451 , LYS B:455 , HOH B:889 , LYS C:116 , VAL C:117 , ASP C:137 , GLN C:142 , ARG C:145 , PHE C:165 , MG C:707 , HOH C:805 , HOH C:816 , HOH C:869 , HOH C:873 , LYS D:523 , DGT D:701BINDING SITE FOR RESIDUE DGT C 702
13BC4SOFTWARELYS A:523 , DGT A:703 , LYS B:116 , VAL B:117 , ASP B:137 , GLN B:142 , ARG B:145 , PHE B:165 , MG B:703 , TYR C:155 , VAL C:156 , VAL C:378 , ARG C:451 , LYS C:455 , HOH C:820 , HOH C:842BINDING SITE FOR RESIDUE DGT C 703
14BC5SOFTWAREGLN C:149 , ARG C:164 , ARG C:206 , HIS C:210 , HIS C:215 , HIS C:233 , LYS C:312 , TYR C:315 , ASP C:319 , ARG C:366 , TYR C:374 , GLN C:375 , MG C:706 , HOH C:804 , HOH C:809 , HOH C:822 , HOH C:830 , HOH C:837 , HOH C:854 , HOH C:857 , HOH C:871BINDING SITE FOR RESIDUE DCP C 704
15BC6SOFTWAREDGT A:701 , DGT C:701 , HOH C:801BINDING SITE FOR RESIDUE MG C 705
16BC7SOFTWARELYS C:312 , DCP C:704 , HOH C:809BINDING SITE FOR RESIDUE MG C 706
17BC8SOFTWAREDGT C:702 , HOH C:873 , DGT D:701BINDING SITE FOR RESIDUE MG C 707
18BC9SOFTWAREVAL B:156 , PHE B:157 , ILE B:325 , ARG B:372 , HIS B:376 , LYS B:377 , VAL C:117 , ASN C:119 , HIS C:125 , DGT C:702 , MG C:707 , HOH C:873 , ASP D:330 , ARG D:333 , PHE D:337 , ARG D:352 , LYS D:354 , ASN D:358 , LYS D:523 , HOH D:839 , HOH D:865 , HOH D:916 , HOH D:918BINDING SITE FOR RESIDUE DGT D 701
19CC1SOFTWAREGLN D:149 , LEU D:150 , ARG D:164 , ARG D:206 , HIS D:210 , HIS D:215 , HIS D:233 , LYS D:312 , TYR D:315 , ASP D:319 , ARG D:366 , TYR D:374 , GLN D:375 , MG D:703 , HOH D:803 , HOH D:811 , HOH D:814 , HOH D:820 , HOH D:827 , HOH D:829 , HOH D:843 , HOH D:846 , HOH D:851 , HOH D:863 , HOH D:890BINDING SITE FOR RESIDUE DCP D 702
20CC2SOFTWAREDCP D:702 , HOH D:803 , HOH D:811 , HOH D:823 , HOH D:851BINDING SITE FOR RESIDUE MG D 703

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QFY)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4QFY)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QFY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QFY)

(-) Exons   (0, 0)

(no "Exon" information available for 4QFY)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:480
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee...eeeeehhhhhhhhhhhhhhhhhhh..hhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.......hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh..........hhhhhhhhhh........hhhhhhhhhhhhhhhh.....hhhhhhhheeeeee..eeeeeee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh....ee.hhh.ee...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh...eeeeee...........hhhhhhhhhhh...........hhh.eeeeeeeee......hhhhhheee...........hhhhh........eeeeeeeee...hhhhhhhhhhhhhhhhhhh......hhhhhh..hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4qfy A 114 TMKVINDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCRNLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSNGIKPVMEQYGLIPEEDICFIKEQIVGPLELWPYKGRPENKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNELRICARDKEVGNLYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYRISTAIDDMEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFKYVGETQPTGQIKIKREDYESLPKEVASAKPKVLLDVKLKAEDFIVDVINMDYGMQEKNPIDHVSFYCKTAPNRAIRITKNQVSQLLPEKFAEQLIRVYCKKVDRKSLYAARQYFVQWCADRNFTKPQDGDVIAPLITPQKKEWN 599
                                   123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273   ||  289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599
                                                                                                                                                                                             277|                                                                                                                                                                                                                                                                                                                           
                                                                                                                                                                                              284                                                                                                                                                                                                                                                                                                                           


Chain B from PDB  Type:PROTEIN  Length:481
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee...eeeeehhhhhhhhhhhhhhhhhhh..hhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.......hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh.hhhhhhhh..hhhhhhhhhhhhhhh..........hhhhhhhhhh........hhhhhhhhhhhhhhhh.....hhhhhhhheeeeee..eeeeeee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh....ee.hhh.ee...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh....eeeeee........hhhhhhhhhhhhhh...........hhh.eeeeeeeee......hhhhhheeee..eeeeee..hhhhh........eeeeeeeee...hhhhhhhhhhhhhhhhhhh......hhhhhh..hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qfy B 113 DTMKVINDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCRNLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSNGIKPVMEQYGLIPEEDICFIKEQIVGPLELWPYKGRPENKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNELRICARDKEVGNLYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYRISTAIDDMEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFKYVGETQPTGQIKIKREDYESLPKEVASAKPKVLLDVKLKAEDFIVDVINMDYGMQEKNPIDHVSFYCKTAPNRAIRITKNQVSQLLPEKFAEQLIRVYCKKVDRKSLYAARQYFVQWCADRNFTKPQDGDVIAPLITPQKKEWN 599
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    || 288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598 
                                                                                                                                                                                              277|                                                                                                                                                                                                                                                                                                                           
                                                                                                                                                                                               284                                                                                                                                                                                                                                                                                                                           


Chain C from PDB  Type:PROTEIN  Length:481
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee...eeeeehhhhhhhhhhhhhhhhhhh..hhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.......hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh..........hhhhhhhhhh........hhhhhhhhhhhhhhhh.....hhhhhhhheeeeee..eeeeeee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh....ee.hhh.ee...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh....eeeeee........hhhhh.hhhhhhhh...........hhh.eeeeeeeee......hhhhhheeee..eeeeee..hhhhh........eeeeeeeee...hhhhhhhhhhhhhhhhhhh......hhhhhh..hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qfy C 113 DTMKVINDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCRNLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSNGIKPVMEQYGLIPEEDICFIKEQIVGPLELWPYKGRPENKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNELRICARDKEVGNLYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYRISTAIDDMEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFKYVGETQPTGQIKIKREDYESLPKEVASAKPKVLLDVKLKAEDFIVDVINMDYGMQEKNPIDHVSFYCKTAPNRAIRITKNQVSQLLPEKFAEQLIRVYCKKVDRKSLYAARQYFVQWCADRNFTKPQDGDVIAPLITPQKKEWN 599
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    || 288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598 
                                                                                                                                                                                              277|                                                                                                                                                                                                                                                                                                                           
                                                                                                                                                                                               284                                                                                                                                                                                                                                                                                                                           


Chain D from PDB  Type:PROTEIN  Length:481
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee...eeeeehhhhhhhhhhhhhhhhhhh..hhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.......hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh..........hhhhhhhhhh........hhhhhhhhhhhhhhhh.....hhhhhhhheeeee....eeeeee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh....ee.....ee...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh....eeeeee........hhhhhhhhhhhhhhh..........hhh.eeeeeeeee......hhhhhh.eee..eeeeee..hhhhh........eeeeeeeee...hhhhhhhhhhhhhhhhhhh......hhhhhh..hhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qfy D 113 DTMKVINDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCRNLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSNGIKPVMEQYGLIPEEDICFIKEQIVGPLELWPYKGRPENKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNELRICARDKEVGNLYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYRISTAIDDMEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFKYVGETQPTGQIKIKREDYESLPKEVASAKPKVLLDVKLKAEDFIVDVINMDYGMQEKNPIDHVSFYCKTAPNRAIRITKNQVSQLLPEKFAEQLIRVYCKKVDRKSLYAARQYFVQWCADRNFTKPQDGDVIAPLITPQKKEWN 599
                                   122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272    || 288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598 
                                                                                                                                                                                              277|                                                                                                                                                                                                                                                                                                                           
                                                                                                                                                                                               284
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QFY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QFY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QFY)

(-) Gene Ontology  (23, 23)

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  4qfy
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        SAMH1_HUMAN | Q9Y3Z3: 2e8o 3u1n 4bzb 4bzc 4cc9 4mz7 4q7h 4qfx 4qfz 4qg0 4qg1 4qg2 4qg4 4rxo 4rxp 4rxq 4rxr 4rxs 4tnp 4tnq 4tnr 4tnx 4tny 4tnz 4to0 4to1 4to2 4to3 4to4 4to5 4to6 4zwe 4zwg 5ao0 5ao1 5ao2 5ao3 5ao4

(-) Related Entries Specified in the PDB File

4bzb 4bzc 4mz7 4qfx 4qfz 4qg0 4qg1 4qg2 4qg4